Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.44■■□□□ 1.02
NECTIN4Q96NY8 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.44■■□□□ 1.02
NECTIN4Q96NY8 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NECTIN4Q96NY8 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
NECTIN4Q96NY8 AC087633.2-202ENST00000565166 1439 ntBASIC21.44■■□□□ 1.02
NECTIN4Q96NY8 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NECTIN4Q96NY8 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
NECTIN4Q96NY8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
NECTIN4Q96NY8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
NECTIN4Q96NY8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NECTIN4Q96NY8 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
NECTIN4Q96NY8 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
NECTIN4Q96NY8 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.44■■□□□ 1.02
NECTIN4Q96NY8 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
NECTIN4Q96NY8 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
NECTIN4Q96NY8 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NECTIN4Q96NY8 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.43■■□□□ 1.02
NECTIN4Q96NY8 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.43■■□□□ 1.02
NECTIN4Q96NY8 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.43■■□□□ 1.02
NECTIN4Q96NY8 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NECTIN4Q96NY8 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.43■■□□□ 1.02
NECTIN4Q96NY8 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
NECTIN4Q96NY8 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
NECTIN4Q96NY8 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.43■■□□□ 1.02
NECTIN4Q96NY8 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
NECTIN4Q96NY8 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.43■■□□□ 1.02
NECTIN4Q96NY8 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NECTIN4Q96NY8 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.43■■□□□ 1.02
NECTIN4Q96NY8 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
NECTIN4Q96NY8 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NECTIN4Q96NY8 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NECTIN4Q96NY8 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
NECTIN4Q96NY8 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NECTIN4Q96NY8 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
NECTIN4Q96NY8 AL390719.1-204ENST00000412397 1219 ntBASIC21.42■■□□□ 1.02
NECTIN4Q96NY8 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NECTIN4Q96NY8 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NECTIN4Q96NY8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
NECTIN4Q96NY8 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NECTIN4Q96NY8 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.42■■□□□ 1.02
NECTIN4Q96NY8 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.42■■□□□ 1.02
NECTIN4Q96NY8 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.42■■□□□ 1.02
NECTIN4Q96NY8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
NECTIN4Q96NY8 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NECTIN4Q96NY8 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NECTIN4Q96NY8 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NECTIN4Q96NY8 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NECTIN4Q96NY8 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NECTIN4Q96NY8 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.41■■□□□ 1.02
NECTIN4Q96NY8 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
NECTIN4Q96NY8 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NECTIN4Q96NY8 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NECTIN4Q96NY8 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NECTIN4Q96NY8 RCN1P1-201ENST00000400413 996 ntBASIC21.41■■□□□ 1.02
NECTIN4Q96NY8 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.41■■□□□ 1.02
NECTIN4Q96NY8 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.41■■□□□ 1.02
NECTIN4Q96NY8 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.41■■□□□ 1.02
NECTIN4Q96NY8 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.41■■□□□ 1.02
NECTIN4Q96NY8 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
NECTIN4Q96NY8 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.41■■□□□ 1.02
NECTIN4Q96NY8 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
NECTIN4Q96NY8 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NECTIN4Q96NY8 AC068473.5-201ENST00000616428 2072 ntBASIC21.41■■□□□ 1.02
NECTIN4Q96NY8 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.4■■□□□ 1.02
NECTIN4Q96NY8 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.4■■□□□ 1.02
NECTIN4Q96NY8 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NECTIN4Q96NY8 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NECTIN4Q96NY8 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NECTIN4Q96NY8 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NECTIN4Q96NY8 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NECTIN4Q96NY8 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.4■■□□□ 1.02
NECTIN4Q96NY8 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NECTIN4Q96NY8 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.4■■□□□ 1.02
NECTIN4Q96NY8 AL355075.4-201ENST00000554988 638 ntBASIC21.4■■□□□ 1.02
NECTIN4Q96NY8 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
NECTIN4Q96NY8 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.4■■□□□ 1.02
NECTIN4Q96NY8 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
NECTIN4Q96NY8 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
NECTIN4Q96NY8 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.39■■□□□ 1.02
NECTIN4Q96NY8 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
NECTIN4Q96NY8 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
NECTIN4Q96NY8 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.39■■□□□ 1.02
NECTIN4Q96NY8 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
NECTIN4Q96NY8 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
NECTIN4Q96NY8 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
NECTIN4Q96NY8 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NECTIN4Q96NY8 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.39■■□□□ 1.01
NECTIN4Q96NY8 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NECTIN4Q96NY8 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
NECTIN4Q96NY8 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.39■■□□□ 1.01
NECTIN4Q96NY8 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
NECTIN4Q96NY8 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
NECTIN4Q96NY8 TSPY15P-201ENST00000457163 923 ntBASIC21.39■■□□□ 1.01
NECTIN4Q96NY8 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.39■■□□□ 1.01
NECTIN4Q96NY8 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NECTIN4Q96NY8 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.39■■□□□ 1.01
NECTIN4Q96NY8 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
NECTIN4Q96NY8 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.39■■□□□ 1.01
NECTIN4Q96NY8 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NECTIN4Q96NY8 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms