Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
NBPF4Q96M43 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC27.28■■□□□ 1.96
NBPF4Q96M43 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
NBPF4Q96M43 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
NBPF4Q96M43 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
NBPF4Q96M43 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
NBPF4Q96M43 MIR718-201ENST00000390190 70 ntBASIC27.28■■□□□ 1.96
NBPF4Q96M43 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
NBPF4Q96M43 SERP1-205ENST00000487153 657 ntTSL 4 BASIC27.28■■□□□ 1.96
NBPF4Q96M43 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
NBPF4Q96M43 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC27.28■■□□□ 1.96
NBPF4Q96M43 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
NBPF4Q96M43 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
NBPF4Q96M43 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
NBPF4Q96M43 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
NBPF4Q96M43 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
NBPF4Q96M43 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC27.27■■□□□ 1.96
NBPF4Q96M43 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
NBPF4Q96M43 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
NBPF4Q96M43 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
NBPF4Q96M43 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC27.27■■□□□ 1.96
NBPF4Q96M43 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC27.27■■□□□ 1.96
NBPF4Q96M43 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
NBPF4Q96M43 MTDHP1-201ENST00000605323 784 ntBASIC27.27■■□□□ 1.96
NBPF4Q96M43 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
NBPF4Q96M43 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
NBPF4Q96M43 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
NBPF4Q96M43 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC27.27■■□□□ 1.96
NBPF4Q96M43 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
NBPF4Q96M43 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
NBPF4Q96M43 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
NBPF4Q96M43 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
NBPF4Q96M43 AC233723.2-201ENST00000623798 2106 ntBASIC27.26■■□□□ 1.96
NBPF4Q96M43 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
NBPF4Q96M43 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC27.26■■□□□ 1.95
NBPF4Q96M43 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
NBPF4Q96M43 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
NBPF4Q96M43 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
NBPF4Q96M43 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
NBPF4Q96M43 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
NBPF4Q96M43 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
NBPF4Q96M43 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
NBPF4Q96M43 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
NBPF4Q96M43 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC27.26■■□□□ 1.95
NBPF4Q96M43 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
NBPF4Q96M43 ISG20-202ENST00000379224 540 ntTSL 3 BASIC27.26■■□□□ 1.95
NBPF4Q96M43 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC27.26■■□□□ 1.95
NBPF4Q96M43 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
NBPF4Q96M43 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
NBPF4Q96M43 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC27.26■■□□□ 1.95
NBPF4Q96M43 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC27.26■■□□□ 1.95
NBPF4Q96M43 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
NBPF4Q96M43 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
NBPF4Q96M43 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
NBPF4Q96M43 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
NBPF4Q96M43 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
NBPF4Q96M43 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
NBPF4Q96M43 SNORA78-201ENST00000459373 127 ntBASIC27.25■■□□□ 1.95
NBPF4Q96M43 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
NBPF4Q96M43 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC27.25■■□□□ 1.95
NBPF4Q96M43 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC27.25■■□□□ 1.95
NBPF4Q96M43 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC27.25■■□□□ 1.95
NBPF4Q96M43 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC27.25■■□□□ 1.95
NBPF4Q96M43 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC27.25■■□□□ 1.95
NBPF4Q96M43 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
NBPF4Q96M43 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
NBPF4Q96M43 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
NBPF4Q96M43 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
NBPF4Q96M43 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
NBPF4Q96M43 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
NBPF4Q96M43 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
NBPF4Q96M43 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC27.24■■□□□ 1.95
NBPF4Q96M43 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
NBPF4Q96M43 THEM4-205ENST00000489410 643 ntTSL 2 BASIC27.24■■□□□ 1.95
NBPF4Q96M43 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC27.24■■□□□ 1.95
NBPF4Q96M43 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
NBPF4Q96M43 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
NBPF4Q96M43 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC27.23■■□□□ 1.95
NBPF4Q96M43 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC27.23■■□□□ 1.95
NBPF4Q96M43 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
NBPF4Q96M43 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC27.23■■□□□ 1.95
NBPF4Q96M43 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC27.23■■□□□ 1.95
NBPF4Q96M43 SERF2-207ENST00000409614 582 ntTSL 2 BASIC27.23■■□□□ 1.95
NBPF4Q96M43 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC27.23■■□□□ 1.95
NBPF4Q96M43 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
NBPF4Q96M43 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC27.23■■□□□ 1.95
NBPF4Q96M43 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
NBPF4Q96M43 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC27.22■■□□□ 1.95
NBPF4Q96M43 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC27.22■■□□□ 1.95
NBPF4Q96M43 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC27.22■■□□□ 1.95
NBPF4Q96M43 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
NBPF4Q96M43 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
NBPF4Q96M43 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
NBPF4Q96M43 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC27.22■■□□□ 1.95
NBPF4Q96M43 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
NBPF4Q96M43 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC27.22■■□□□ 1.95
NBPF4Q96M43 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC27.22■■□□□ 1.95
NBPF4Q96M43 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC27.22■■□□□ 1.95
NBPF4Q96M43 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
NBPF4Q96M43 AC120498.8-201ENST00000614275 531 ntBASIC27.22■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms