Protein–RNA interactions for Protein: Q96B67

ARRDC3, Arrestin domain-containing protein 3, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3Q96B67 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ARRDC3Q96B67 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
ARRDC3Q96B67 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.61■□□□□ 0.89
ARRDC3Q96B67 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.61■□□□□ 0.89
ARRDC3Q96B67 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ARRDC3Q96B67 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
ARRDC3Q96B67 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.61■□□□□ 0.89
ARRDC3Q96B67 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARRDC3Q96B67 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ARRDC3Q96B67 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
ARRDC3Q96B67 AC087633.2-202ENST00000565166 1439 ntBASIC20.61■□□□□ 0.89
ARRDC3Q96B67 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARRDC3Q96B67 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.6■□□□□ 0.89
ARRDC3Q96B67 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ARRDC3Q96B67 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARRDC3Q96B67 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ARRDC3Q96B67 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ARRDC3Q96B67 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
ARRDC3Q96B67 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARRDC3Q96B67 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.6■□□□□ 0.89
ARRDC3Q96B67 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ARRDC3Q96B67 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.6■□□□□ 0.89
ARRDC3Q96B67 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.6■□□□□ 0.89
ARRDC3Q96B67 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.6■□□□□ 0.89
ARRDC3Q96B67 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARRDC3Q96B67 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ARRDC3Q96B67 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARRDC3Q96B67 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.59■□□□□ 0.89
ARRDC3Q96B67 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.59■□□□□ 0.89
ARRDC3Q96B67 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARRDC3Q96B67 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.59■□□□□ 0.89
ARRDC3Q96B67 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARRDC3Q96B67 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ARRDC3Q96B67 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ARRDC3Q96B67 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.59■□□□□ 0.89
ARRDC3Q96B67 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.59■□□□□ 0.89
ARRDC3Q96B67 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.59■□□□□ 0.89
ARRDC3Q96B67 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
ARRDC3Q96B67 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ARRDC3Q96B67 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ARRDC3Q96B67 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ARRDC3Q96B67 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ARRDC3Q96B67 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.59■□□□□ 0.89
ARRDC3Q96B67 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARRDC3Q96B67 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARRDC3Q96B67 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARRDC3Q96B67 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARRDC3Q96B67 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARRDC3Q96B67 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.58■□□□□ 0.89
ARRDC3Q96B67 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.58■□□□□ 0.89
ARRDC3Q96B67 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.58■□□□□ 0.89
ARRDC3Q96B67 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.58■□□□□ 0.89
ARRDC3Q96B67 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ARRDC3Q96B67 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.58■□□□□ 0.89
ARRDC3Q96B67 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.58■□□□□ 0.89
ARRDC3Q96B67 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ARRDC3Q96B67 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.58■□□□□ 0.88
ARRDC3Q96B67 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.58■□□□□ 0.88
ARRDC3Q96B67 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
ARRDC3Q96B67 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ARRDC3Q96B67 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ARRDC3Q96B67 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ARRDC3Q96B67 AC011484.1-201ENST00000377652 1995 ntBASIC20.57■□□□□ 0.88
ARRDC3Q96B67 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARRDC3Q96B67 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ARRDC3Q96B67 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ARRDC3Q96B67 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.57■□□□□ 0.88
ARRDC3Q96B67 AL049796.1-201ENST00000565336 1766 ntBASIC20.57■□□□□ 0.88
ARRDC3Q96B67 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ARRDC3Q96B67 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARRDC3Q96B67 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ARRDC3Q96B67 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.57■□□□□ 0.88
ARRDC3Q96B67 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ARRDC3Q96B67 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.57■□□□□ 0.88
ARRDC3Q96B67 UNC93B5-201ENST00000530315 699 ntBASIC20.57■□□□□ 0.88
ARRDC3Q96B67 LINC00565-201ENST00000562710 2331 ntBASIC20.57■□□□□ 0.88
ARRDC3Q96B67 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ARRDC3Q96B67 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARRDC3Q96B67 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARRDC3Q96B67 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
ARRDC3Q96B67 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARRDC3Q96B67 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARRDC3Q96B67 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ARRDC3Q96B67 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.56■□□□□ 0.88
ARRDC3Q96B67 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARRDC3Q96B67 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ARRDC3Q96B67 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.56■□□□□ 0.88
ARRDC3Q96B67 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ARRDC3Q96B67 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARRDC3Q96B67 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARRDC3Q96B67 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.56■□□□□ 0.88
ARRDC3Q96B67 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARRDC3Q96B67 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.56■□□□□ 0.88
ARRDC3Q96B67 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARRDC3Q96B67 ESRRAP1-201ENST00000400596 1257 ntBASIC20.56■□□□□ 0.88
ARRDC3Q96B67 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARRDC3Q96B67 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
ARRDC3Q96B67 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARRDC3Q96B67 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.56■□□□□ 0.88
ARRDC3Q96B67 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms