Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RPGRQ92834 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RPGRQ92834 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC25.49■■□□□ 1.67
RPGRQ92834 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RPGRQ92834 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
RPGRQ92834 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
RPGRQ92834 AC239809.2-201ENST00000415381 517 ntBASIC25.49■■□□□ 1.67
RPGRQ92834 PGM5P4-201ENST00000421970 445 ntBASIC25.49■■□□□ 1.67
RPGRQ92834 ABHD17AP6-201ENST00000458502 1044 ntBASIC25.49■■□□□ 1.67
RPGRQ92834 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RPGRQ92834 TK2-204ENST00000525974 1178 ntTSL 2 BASIC25.49■■□□□ 1.67
RPGRQ92834 REXO2-216ENST00000544196 452 ntTSL 3 BASIC25.49■■□□□ 1.67
RPGRQ92834 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC25.49■■□□□ 1.67
RPGRQ92834 BRWD1-AS2-201ENST00000603064 1028 ntBASIC25.49■■□□□ 1.67
RPGRQ92834 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RPGRQ92834 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RPGRQ92834 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RPGRQ92834 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RPGRQ92834 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RPGRQ92834 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC25.48■■□□□ 1.67
RPGRQ92834 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RPGRQ92834 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
RPGRQ92834 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RPGRQ92834 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RPGRQ92834 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RPGRQ92834 SERF2-207ENST00000409614 582 ntTSL 2 BASIC25.48■■□□□ 1.67
RPGRQ92834 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RPGRQ92834 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC25.48■■□□□ 1.67
RPGRQ92834 SERP1-205ENST00000487153 657 ntTSL 4 BASIC25.48■■□□□ 1.67
RPGRQ92834 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RPGRQ92834 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC25.48■■□□□ 1.67
RPGRQ92834 AC120498.8-201ENST00000614275 531 ntBASIC25.48■■□□□ 1.67
RPGRQ92834 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC25.48■■□□□ 1.67
RPGRQ92834 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
RPGRQ92834 AC006557.6-201ENST00000623071 864 ntBASIC25.48■■□□□ 1.67
RPGRQ92834 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
RPGRQ92834 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RPGRQ92834 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC25.48■■□□□ 1.67
RPGRQ92834 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RPGRQ92834 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RPGRQ92834 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RPGRQ92834 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC25.47■■□□□ 1.67
RPGRQ92834 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RPGRQ92834 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC25.47■■□□□ 1.67
RPGRQ92834 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RPGRQ92834 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
RPGRQ92834 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
RPGRQ92834 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RPGRQ92834 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
RPGRQ92834 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC25.47■■□□□ 1.67
RPGRQ92834 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
RPGRQ92834 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC25.47■■□□□ 1.67
RPGRQ92834 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
RPGRQ92834 TSPY7P-201ENST00000431358 1114 ntBASIC25.47■■□□□ 1.67
RPGRQ92834 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC25.47■■□□□ 1.67
RPGRQ92834 AC133681.1-201ENST00000465482 601 ntBASIC25.47■■□□□ 1.67
RPGRQ92834 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC25.47■■□□□ 1.67
RPGRQ92834 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
RPGRQ92834 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
RPGRQ92834 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RPGRQ92834 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC25.47■■□□□ 1.67
RPGRQ92834 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC25.47■■□□□ 1.67
RPGRQ92834 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
RPGRQ92834 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
RPGRQ92834 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC25.47■■□□□ 1.67
RPGRQ92834 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
RPGRQ92834 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RPGRQ92834 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RPGRQ92834 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC25.46■■□□□ 1.67
RPGRQ92834 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RPGRQ92834 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC25.46■■□□□ 1.67
RPGRQ92834 AC005829.2-201ENST00000571422 1056 ntBASIC25.46■■□□□ 1.67
RPGRQ92834 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC25.46■■□□□ 1.67
RPGRQ92834 LINC01023-201ENST00000606054 436 ntBASIC25.46■■□□□ 1.67
RPGRQ92834 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
RPGRQ92834 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC25.46■■□□□ 1.67
RPGRQ92834 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RPGRQ92834 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RPGRQ92834 KRT17P2-201ENST00000300992 1314 ntBASIC25.45■■□□□ 1.66
RPGRQ92834 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
RPGRQ92834 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RPGRQ92834 RPS20-210ENST00000523936 899 ntTSL 2 BASIC25.45■■□□□ 1.66
RPGRQ92834 BX088651.1-201ENST00000540551 451 ntBASIC25.45■■□□□ 1.66
RPGRQ92834 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RPGRQ92834 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RPGRQ92834 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC25.44■■□□□ 1.66
RPGRQ92834 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RPGRQ92834 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RPGRQ92834 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RPGRQ92834 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
RPGRQ92834 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RPGRQ92834 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC25.44■■□□□ 1.66
RPGRQ92834 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RPGRQ92834 FAM210CP-201ENST00000445714 574 ntBASIC25.44■■□□□ 1.66
RPGRQ92834 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RPGRQ92834 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC25.44■■□□□ 1.66
RPGRQ92834 CASK-201ENST00000378154 2494 ntTSL 5 BASIC25.44■■□□□ 1.66
RPGRQ92834 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC25.44■■□□□ 1.66
RPGRQ92834 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC25.44■■□□□ 1.66
RPGRQ92834 ME2-208ENST00000638937 2471 ntTSL 5 BASIC25.43■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms