Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 AL050303.2-201ENST00000619798 666 ntBASIC20.8■□□□□ 0.92
PTCD2Q8WV60 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTCD2Q8WV60 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PTCD2Q8WV60 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTCD2Q8WV60 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTCD2Q8WV60 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTCD2Q8WV60 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
PTCD2Q8WV60 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTCD2Q8WV60 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTCD2Q8WV60 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTCD2Q8WV60 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PTCD2Q8WV60 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
PTCD2Q8WV60 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PTCD2Q8WV60 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTCD2Q8WV60 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.79■□□□□ 0.92
PTCD2Q8WV60 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.79■□□□□ 0.92
PTCD2Q8WV60 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
PTCD2Q8WV60 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PTCD2Q8WV60 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.79■□□□□ 0.92
PTCD2Q8WV60 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTCD2Q8WV60 AC007225.1-201ENST00000566331 1836 ntBASIC20.79■□□□□ 0.92
PTCD2Q8WV60 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.79■□□□□ 0.92
PTCD2Q8WV60 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTCD2Q8WV60 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.79■□□□□ 0.92
PTCD2Q8WV60 ID1-201ENST00000376105 1233 ntBASIC20.79■□□□□ 0.92
PTCD2Q8WV60 HLA-L-209ENST00000420110 1011 ntBASIC20.79■□□□□ 0.92
PTCD2Q8WV60 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.79■□□□□ 0.92
PTCD2Q8WV60 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PTCD2Q8WV60 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
PTCD2Q8WV60 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PTCD2Q8WV60 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PTCD2Q8WV60 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTCD2Q8WV60 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PTCD2Q8WV60 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
PTCD2Q8WV60 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.78■□□□□ 0.92
PTCD2Q8WV60 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTCD2Q8WV60 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PTCD2Q8WV60 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PTCD2Q8WV60 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTCD2Q8WV60 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTCD2Q8WV60 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTCD2Q8WV60 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTCD2Q8WV60 GABARAPL3-202ENST00000624044 1851 ntBASIC20.78■□□□□ 0.92
PTCD2Q8WV60 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTCD2Q8WV60 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTCD2Q8WV60 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTCD2Q8WV60 SLC7A5P1-201ENST00000568957 537 ntBASIC20.78■□□□□ 0.92
PTCD2Q8WV60 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PTCD2Q8WV60 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTCD2Q8WV60 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.78■□□□□ 0.92
PTCD2Q8WV60 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PTCD2Q8WV60 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PTCD2Q8WV60 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTCD2Q8WV60 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PTCD2Q8WV60 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PTCD2Q8WV60 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTCD2Q8WV60 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTCD2Q8WV60 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PTCD2Q8WV60 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTCD2Q8WV60 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTCD2Q8WV60 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PTCD2Q8WV60 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTCD2Q8WV60 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.77■□□□□ 0.92
PTCD2Q8WV60 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTCD2Q8WV60 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTCD2Q8WV60 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PTCD2Q8WV60 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.77■□□□□ 0.92
PTCD2Q8WV60 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PTCD2Q8WV60 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PTCD2Q8WV60 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.77■□□□□ 0.92
PTCD2Q8WV60 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.77■□□□□ 0.92
PTCD2Q8WV60 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.77■□□□□ 0.92
PTCD2Q8WV60 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.77■□□□□ 0.92
PTCD2Q8WV60 AC010536.3-201ENST00000620306 533 ntBASIC20.77■□□□□ 0.92
PTCD2Q8WV60 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTCD2Q8WV60 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTCD2Q8WV60 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.77■□□□□ 0.92
PTCD2Q8WV60 AP005212.1-201ENST00000581547 1997 ntBASIC20.77■□□□□ 0.92
PTCD2Q8WV60 AL157384.1-201ENST00000445995 2473 ntBASIC20.77■□□□□ 0.91
PTCD2Q8WV60 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTCD2Q8WV60 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTCD2Q8WV60 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.76■□□□□ 0.91
PTCD2Q8WV60 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTCD2Q8WV60 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.76■□□□□ 0.91
PTCD2Q8WV60 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTCD2Q8WV60 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
PTCD2Q8WV60 AC012183.1-201ENST00000625197 499 ntBASIC20.76■□□□□ 0.91
PTCD2Q8WV60 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.76■□□□□ 0.91
PTCD2Q8WV60 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PTCD2Q8WV60 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTCD2Q8WV60 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PTCD2Q8WV60 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTCD2Q8WV60 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.75■□□□□ 0.91
PTCD2Q8WV60 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTCD2Q8WV60 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PTCD2Q8WV60 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTCD2Q8WV60 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTCD2Q8WV60 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.75■□□□□ 0.91
PTCD2Q8WV60 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PTCD2Q8WV60 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms