Protein–RNA interactions for Protein: Q8TDC3

BRSK1, Serine/threonine-protein kinase BRSK1, humanhuman

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRSK1Q8TDC3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRSK1Q8TDC3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.65■□□□□ 0.9
BRSK1Q8TDC3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRSK1Q8TDC3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.64■□□□□ 0.9
BRSK1Q8TDC3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
BRSK1Q8TDC3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
BRSK1Q8TDC3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
BRSK1Q8TDC3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
BRSK1Q8TDC3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
BRSK1Q8TDC3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
BRSK1Q8TDC3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
BRSK1Q8TDC3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
BRSK1Q8TDC3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BRSK1Q8TDC3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.64■□□□□ 0.89
BRSK1Q8TDC3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.64■□□□□ 0.89
BRSK1Q8TDC3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.64■□□□□ 0.89
BRSK1Q8TDC3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
BRSK1Q8TDC3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.64■□□□□ 0.89
BRSK1Q8TDC3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
BRSK1Q8TDC3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
BRSK1Q8TDC3 DUX4L16-201ENST00000555130 1264 ntBASIC20.64■□□□□ 0.89
BRSK1Q8TDC3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.64■□□□□ 0.89
BRSK1Q8TDC3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.64■□□□□ 0.89
BRSK1Q8TDC3 AC231657.2-201ENST00000624556 255 ntBASIC20.64■□□□□ 0.89
BRSK1Q8TDC3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.64■□□□□ 0.89
BRSK1Q8TDC3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
BRSK1Q8TDC3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.64■□□□□ 0.89
BRSK1Q8TDC3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
BRSK1Q8TDC3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
BRSK1Q8TDC3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
BRSK1Q8TDC3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
BRSK1Q8TDC3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BRSK1Q8TDC3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.63■□□□□ 0.89
BRSK1Q8TDC3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.63■□□□□ 0.89
BRSK1Q8TDC3 AL162412.1-201ENST00000567129 965 ntBASIC20.63■□□□□ 0.89
BRSK1Q8TDC3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BRSK1Q8TDC3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.63■□□□□ 0.89
BRSK1Q8TDC3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BRSK1Q8TDC3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BRSK1Q8TDC3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.63■□□□□ 0.89
BRSK1Q8TDC3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
BRSK1Q8TDC3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BRSK1Q8TDC3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BRSK1Q8TDC3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
BRSK1Q8TDC3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BRSK1Q8TDC3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BRSK1Q8TDC3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
BRSK1Q8TDC3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.62■□□□□ 0.89
BRSK1Q8TDC3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.62■□□□□ 0.89
BRSK1Q8TDC3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.62■□□□□ 0.89
BRSK1Q8TDC3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
BRSK1Q8TDC3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
BRSK1Q8TDC3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BRSK1Q8TDC3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
BRSK1Q8TDC3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
BRSK1Q8TDC3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.62■□□□□ 0.89
BRSK1Q8TDC3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
BRSK1Q8TDC3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
BRSK1Q8TDC3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.61■□□□□ 0.89
BRSK1Q8TDC3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
BRSK1Q8TDC3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
BRSK1Q8TDC3 FP700111.2-201ENST00000619190 1892 ntBASIC20.61■□□□□ 0.89
BRSK1Q8TDC3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
BRSK1Q8TDC3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.61■□□□□ 0.89
BRSK1Q8TDC3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.61■□□□□ 0.89
BRSK1Q8TDC3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.61■□□□□ 0.89
BRSK1Q8TDC3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.61■□□□□ 0.89
BRSK1Q8TDC3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BRSK1Q8TDC3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
BRSK1Q8TDC3 FAM21FP-204ENST00000608637 956 ntBASIC20.61■□□□□ 0.89
BRSK1Q8TDC3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
BRSK1Q8TDC3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
BRSK1Q8TDC3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
BRSK1Q8TDC3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
BRSK1Q8TDC3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BRSK1Q8TDC3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BRSK1Q8TDC3 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
BRSK1Q8TDC3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
BRSK1Q8TDC3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
BRSK1Q8TDC3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
BRSK1Q8TDC3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BRSK1Q8TDC3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
BRSK1Q8TDC3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.6■□□□□ 0.89
BRSK1Q8TDC3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BRSK1Q8TDC3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BRSK1Q8TDC3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BRSK1Q8TDC3 CNN2P6-201ENST00000439038 900 ntBASIC20.6■□□□□ 0.89
BRSK1Q8TDC3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.6■□□□□ 0.89
BRSK1Q8TDC3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.6■□□□□ 0.89
BRSK1Q8TDC3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
BRSK1Q8TDC3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.6■□□□□ 0.89
BRSK1Q8TDC3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BRSK1Q8TDC3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.6■□□□□ 0.89
BRSK1Q8TDC3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
BRSK1Q8TDC3 AC073111.5-205ENST00000641717 521 ntBASIC20.6■□□□□ 0.89
BRSK1Q8TDC3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
BRSK1Q8TDC3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BRSK1Q8TDC3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
BRSK1Q8TDC3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
BRSK1Q8TDC3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms