Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.35■□□□□ 0.69
SIMC1Q8NDZ2 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIMC1Q8NDZ2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SIMC1Q8NDZ2 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIMC1Q8NDZ2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SIMC1Q8NDZ2 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIMC1Q8NDZ2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SIMC1Q8NDZ2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SIMC1Q8NDZ2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SIMC1Q8NDZ2 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.34■□□□□ 0.69
SIMC1Q8NDZ2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.34■□□□□ 0.69
SIMC1Q8NDZ2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.34■□□□□ 0.69
SIMC1Q8NDZ2 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SIMC1Q8NDZ2 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SIMC1Q8NDZ2 AC016769.1-201ENST00000409132 1010 ntBASIC19.34■□□□□ 0.69
SIMC1Q8NDZ2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SIMC1Q8NDZ2 SLC7A5P1-201ENST00000568957 537 ntBASIC19.34■□□□□ 0.69
SIMC1Q8NDZ2 MFSD11-216ENST00000590393 1141 ntBASIC19.34■□□□□ 0.69
SIMC1Q8NDZ2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SIMC1Q8NDZ2 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SIMC1Q8NDZ2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SIMC1Q8NDZ2 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SIMC1Q8NDZ2 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SIMC1Q8NDZ2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.33■□□□□ 0.69
SIMC1Q8NDZ2 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.33■□□□□ 0.69
SIMC1Q8NDZ2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.33■□□□□ 0.69
SIMC1Q8NDZ2 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SIMC1Q8NDZ2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
SIMC1Q8NDZ2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SIMC1Q8NDZ2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SIMC1Q8NDZ2 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SIMC1Q8NDZ2 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SIMC1Q8NDZ2 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.33■□□□□ 0.68
SIMC1Q8NDZ2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SIMC1Q8NDZ2 AL157384.1-201ENST00000445995 2473 ntBASIC19.33■□□□□ 0.68
SIMC1Q8NDZ2 AC121338.2-201ENST00000622535 1744 ntBASIC19.33■□□□□ 0.68
SIMC1Q8NDZ2 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.33■□□□□ 0.68
SIMC1Q8NDZ2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.33■□□□□ 0.68
SIMC1Q8NDZ2 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIMC1Q8NDZ2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SIMC1Q8NDZ2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIMC1Q8NDZ2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.32■□□□□ 0.68
SIMC1Q8NDZ2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SIMC1Q8NDZ2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIMC1Q8NDZ2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIMC1Q8NDZ2 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIMC1Q8NDZ2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIMC1Q8NDZ2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.32■□□□□ 0.68
SIMC1Q8NDZ2 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIMC1Q8NDZ2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
SIMC1Q8NDZ2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.32■□□□□ 0.68
SIMC1Q8NDZ2 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.32■□□□□ 0.68
SIMC1Q8NDZ2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SIMC1Q8NDZ2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SIMC1Q8NDZ2 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.31■□□□□ 0.68
SIMC1Q8NDZ2 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SIMC1Q8NDZ2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
SIMC1Q8NDZ2 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.31■□□□□ 0.68
SIMC1Q8NDZ2 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
SIMC1Q8NDZ2 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SIMC1Q8NDZ2 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SIMC1Q8NDZ2 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SIMC1Q8NDZ2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SIMC1Q8NDZ2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SIMC1Q8NDZ2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.31■□□□□ 0.68
SIMC1Q8NDZ2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.31■□□□□ 0.68
SIMC1Q8NDZ2 AC091799.1-201ENST00000422823 811 ntBASIC19.31■□□□□ 0.68
SIMC1Q8NDZ2 AC245052.3-201ENST00000450182 901 ntBASIC19.31■□□□□ 0.68
SIMC1Q8NDZ2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.31■□□□□ 0.68
SIMC1Q8NDZ2 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SIMC1Q8NDZ2 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SIMC1Q8NDZ2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SIMC1Q8NDZ2 AC010536.3-201ENST00000620306 533 ntBASIC19.31■□□□□ 0.68
SIMC1Q8NDZ2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SIMC1Q8NDZ2 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SIMC1Q8NDZ2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SIMC1Q8NDZ2 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SIMC1Q8NDZ2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.31■□□□□ 0.68
SIMC1Q8NDZ2 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.31■□□□□ 0.68
SIMC1Q8NDZ2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SIMC1Q8NDZ2 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SIMC1Q8NDZ2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SIMC1Q8NDZ2 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.3■□□□□ 0.68
SIMC1Q8NDZ2 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SIMC1Q8NDZ2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SIMC1Q8NDZ2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.3■□□□□ 0.68
SIMC1Q8NDZ2 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SIMC1Q8NDZ2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
SIMC1Q8NDZ2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SIMC1Q8NDZ2 AC090192.1-201ENST00000517740 490 ntBASIC19.3■□□□□ 0.68
SIMC1Q8NDZ2 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SIMC1Q8NDZ2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SIMC1Q8NDZ2 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SIMC1Q8NDZ2 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SIMC1Q8NDZ2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.3■□□□□ 0.68
SIMC1Q8NDZ2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
SIMC1Q8NDZ2 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SIMC1Q8NDZ2 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
SIMC1Q8NDZ2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SIMC1Q8NDZ2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms