Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 QKI-217ENST00000545607 846 ntTSL 54.26□□□□□ -1.732e-6■■■□□ 17.7
LARP4Q71RC2 SMAD5-208ENST00000513418 523 ntTSL 54.02□□□□□ -1.774e-6■■■□□ 17.7
LARP4Q71RC2 PPP2R2A-203ENST00000517754 2357 ntTSL 23.6□□□□□ -1.834e-6■■■□□ 17.7
LARP4Q71RC2 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.36□□□□□ -1.874e-6■■■□□ 17.7
LARP4Q71RC2 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.014e-6■■■□□ 17.7
LARP4Q71RC2 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.024e-6■■■□□ 17.7
LARP4Q71RC2 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.75e-8■■■□□ 17.7
LARP4Q71RC2 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.4■□□□□ 0.75e-8■■■□□ 17.7
LARP4Q71RC2 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.555e-8■■■□□ 17.7
LARP4Q71RC2 ACY1-213ENST00000635941 1691 ntTSL 517.07■□□□□ 0.325e-8■■■□□ 17.7
LARP4Q71RC2 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.66■□□□□ 0.265e-8■■■□□ 17.7
LARP4Q71RC2 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.64■□□□□ 0.255e-8■■■□□ 17.7
LARP4Q71RC2 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.01■□□□□ 0.155e-8■■■□□ 17.7
LARP4Q71RC2 ACY1-229ENST00000638136 1857 ntTSL 514.76□□□□□ -0.055e-8■■■□□ 17.7
LARP4Q71RC2 ACY1-221ENST00000637199 790 ntTSL 214.71□□□□□ -0.055e-8■■■□□ 17.7
LARP4Q71RC2 ACY1-209ENST00000491318 1390 ntTSL 314.71□□□□□ -0.065e-8■■■□□ 17.7
LARP4Q71RC2 ACY1-218ENST00000637034 745 ntTSL 314.17□□□□□ -0.145e-8■■■□□ 17.7
LARP4Q71RC2 ACY1-226ENST00000637746 685 ntTSL 214.17□□□□□ -0.145e-8■■■□□ 17.7
LARP4Q71RC2 ACY1-217ENST00000636880 1457 ntTSL 313.91□□□□□ -0.185e-8■■■□□ 17.7
LARP4Q71RC2 ACY1-208ENST00000490244 812 ntTSL 212.6□□□□□ -0.395e-8■■■□□ 17.7
LARP4Q71RC2 ACY1-220ENST00000637149 386 ntTSL 310.98□□□□□ -0.655e-8■■■□□ 17.7
LARP4Q71RC2 ACY1-227ENST00000638077 456 ntTSL 29.54□□□□□ -0.885e-8■■■□□ 17.7
LARP4Q71RC2 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.393e-9■■■□□ 17.7
LARP4Q71RC2 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.363e-9■■■□□ 17.7
LARP4Q71RC2 ATP5I-203ENST00000506525 496 ntTSL 1 (best)13.85□□□□□ -0.191e-8■■■□□ 17.7
LARP4Q71RC2 ATP5I-204ENST00000515116 247 ntTSL 24.1□□□□□ -1.751e-8■■■□□ 17.7
LARP4Q71RC2 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.35□□□□□ -0.112e-6■■■□□ 17.7
LARP4Q71RC2 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.531e-6■■■□□ 17.7
LARP4Q71RC2 NPC2-202ENST00000434013 875 ntTSL 2 BASIC10.14□□□□□ -0.791e-6■■■□□ 17.7
LARP4Q71RC2 NPC2-205ENST00000554482 583 ntTSL 210.13□□□□□ -0.791e-6■■■□□ 17.7
LARP4Q71RC2 NPC2-203ENST00000541064 1436 ntTSL 2 BASIC8.73□□□□□ -1.011e-6■■■□□ 17.7
LARP4Q71RC2 NPC2-201ENST00000238633 796 ntAPPRIS ALT1 TSL 3 BASIC8.27□□□□□ -1.091e-6■■■□□ 17.7
LARP4Q71RC2 ATP5G2-206ENST00000550241 406 ntTSL 37.96□□□□□ -1.141e-16■■■□□ 17.7
LARP4Q71RC2 CD99-208ENST00000482405 842 ntTSL 219.13■□□□□ 0.654e-7■■■□□ 17.7
LARP4Q71RC2 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.524e-7■■■□□ 17.7
LARP4Q71RC2 CD99-206ENST00000449611 604 ntAPPRIS ALT2 TSL 516.39■□□□□ 0.214e-7■■■□□ 17.7
LARP4Q71RC2 NDUFS7-207ENST00000538523 931 ntTSL 215.96■□□□□ 0.151e-8■■■□□ 17.7
LARP4Q71RC2 NDUFS7-204ENST00000436115 2879 ntTSL 515.14■□□□□ 0.011e-8■■■□□ 17.7
LARP4Q71RC2 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.12■□□□□ 0.011e-8■■■□□ 17.7
LARP4Q71RC2 NDUFS7-208ENST00000538662 1186 ntTSL 214.02□□□□□ -0.171e-8■■■□□ 17.7
LARP4Q71RC2 NDUFS7-209ENST00000538929 630 ntTSL 413.47□□□□□ -0.251e-8■■■□□ 17.7
LARP4Q71RC2 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC12.41□□□□□ -0.421e-8■■■□□ 17.7
LARP4Q71RC2 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 12e-6■■■□□ 17.7
LARP4Q71RC2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.87■□□□□ 0.932e-6■■■□□ 17.7
LARP4Q71RC2 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.85■□□□□ 0.772e-6■■■□□ 17.7
LARP4Q71RC2 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.762e-6■■■□□ 17.7
LARP4Q71RC2 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.97□□□□□ -0.012e-11■■■□□ 17.6
LARP4Q71RC2 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.512e-11■■■□□ 17.6
LARP4Q71RC2 DAD1-204ENST00000538631 441 ntTSL 2 BASIC8.84□□□□□ -0.992e-11■■■□□ 17.6
LARP4Q71RC2 DAD1-203ENST00000535847 591 ntTSL 28.26□□□□□ -1.092e-11■■■□□ 17.6
LARP4Q71RC2 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.123e-9■■■□□ 17.6
LARP4Q71RC2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.54■■□□□ 1.524e-26■■■□□ 17.6
LARP4Q71RC2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.76■■□□□ 1.394e-26■■■□□ 17.6
LARP4Q71RC2 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.26■■□□□ 1.154e-26■■■□□ 17.6
LARP4Q71RC2 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.11■□□□□ 0.811e-61■■■□□ 17.6
LARP4Q71RC2 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.274e-26■■■□□ 17.6
LARP4Q71RC2 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.14e-10■■■□□ 17.6
LARP4Q71RC2 PKM-214ENST00000565143 2301 ntTSL 1 (best)12.82□□□□□ -0.364e-26■■■□□ 17.6
LARP4Q71RC2 PKM-222ENST00000568883 1863 ntTSL 5 BASIC12.68□□□□□ -0.384e-26■■■□□ 17.6
LARP4Q71RC2 PKM-202ENST00000335181 2318 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.444e-26■■■□□ 17.6
LARP4Q71RC2 PKM-219ENST00000567118 2254 ntTSL 211.05□□□□□ -0.644e-26■■■□□ 17.6
LARP4Q71RC2 PKM-212ENST00000564440 3016 ntTSL 1 (best)9.01□□□□□ -0.974e-26■■■□□ 17.6
LARP4Q71RC2 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.85■□□□□ 0.615e-7■■■□□ 17.6
LARP4Q71RC2 ISOC2-207ENST00000590921 2283 ntTSL 218.66■□□□□ 0.585e-7■■■□□ 17.6
LARP4Q71RC2 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.98■□□□□ 0.315e-7■■■□□ 17.6
LARP4Q71RC2 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.265e-7■■■□□ 17.6
LARP4Q71RC2 DTYMK-205ENST00000445261 518 ntTSL 513.15□□□□□ -0.31e-6■■■□□ 17.6
LARP4Q71RC2 DTYMK-204ENST00000432348 926 ntTSL 55.71□□□□□ -1.51e-6■■■□□ 17.6
LARP4Q71RC2 PDE9A-214ENST00000460905 715 ntTSL 520.99■□□□□ 0.958e-7■■■□□ 17.6
LARP4Q71RC2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.44■□□□□ 0.78e-7■■■□□ 17.6
LARP4Q71RC2 PDE9A-225ENST00000490803 1865 ntTSL 1 (best)18.93■□□□□ 0.628e-7■■■□□ 17.6
LARP4Q71RC2 PDE9A-227ENST00000495521 1565 ntTSL 1 (best)18.4■□□□□ 0.548e-7■■■□□ 17.6
LARP4Q71RC2 PDE9A-221ENST00000470987 1954 ntTSL 1 (best)18.31■□□□□ 0.528e-7■■■□□ 17.6
LARP4Q71RC2 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.25■□□□□ 0.518e-7■■■□□ 17.6
LARP4Q71RC2 PDE9A-215ENST00000460989 1521 ntTSL 1 (best)17.54■□□□□ 0.48e-7■■■□□ 17.6
LARP4Q71RC2 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.52■□□□□ 0.398e-7■■■□□ 17.6
LARP4Q71RC2 PDE9A-216ENST00000462571 1784 ntTSL 1 (best)17.16■□□□□ 0.348e-7■■■□□ 17.6
LARP4Q71RC2 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.16■□□□□ 0.348e-7■■■□□ 17.6
LARP4Q71RC2 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.65■□□□□ 0.268e-7■■■□□ 17.6
LARP4Q71RC2 PDE9A-220ENST00000468805 1721 ntTSL 1 (best)16.5■□□□□ 0.238e-7■■■□□ 17.6
LARP4Q71RC2 PDE9A-228ENST00000497805 1908 ntTSL 1 (best)16.33■□□□□ 0.28e-7■■■□□ 17.6
LARP4Q71RC2 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.82■□□□□ 0.128e-7■■■□□ 17.6
LARP4Q71RC2 PDE9A-219ENST00000467403 1661 ntTSL 1 (best)15.31■□□□□ 0.048e-7■■■□□ 17.6
LARP4Q71RC2 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.85□□□□□ -0.198e-7■■■□□ 17.6
LARP4Q71RC2 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC13.56□□□□□ -0.248e-7■■■□□ 17.6
LARP4Q71RC2 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC12.91□□□□□ -0.348e-7■■■□□ 17.6
LARP4Q71RC2 PDE9A-211ENST00000398232 1885 ntTSL 1 (best) BASIC11.52□□□□□ -0.578e-7■■■□□ 17.6
LARP4Q71RC2 PDE9A-207ENST00000398224 1671 ntTSL 1 (best) BASIC10.85□□□□□ -0.678e-7■■■□□ 17.6
LARP4Q71RC2 PDE9A-210ENST00000398229 1684 ntTSL 1 (best) BASIC10.85□□□□□ -0.678e-7■■■□□ 17.6
LARP4Q71RC2 PDE9A-204ENST00000335512 1883 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.838e-7■■■□□ 17.6
LARP4Q71RC2 PDE9A-223ENST00000486902 794 ntTSL 28.45□□□□□ -1.068e-7■■■□□ 17.6
LARP4Q71RC2 PDE9A-222ENST00000472401 431 ntTSL 38.45□□□□□ -1.068e-7■■■□□ 17.6
LARP4Q71RC2 TSPAN4-212ENST00000494815 2187 ntTSL 218.13■□□□□ 0.498e-7■■■□□ 17.6
LARP4Q71RC2 TSPAN4-211ENST00000468468 2777 ntTSL 215.82■□□□□ 0.128e-7■■■□□ 17.6
LARP4Q71RC2 ECH1-203ENST00000594391 919 ntTSL 515.43■□□□□ 0.061e-8■■■□□ 17.6
LARP4Q71RC2 GNAI2-206ENST00000446079 2086 ntTSL 1 (best)15.35■□□□□ 0.054e-7■■■□□ 17.6
LARP4Q71RC2 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.75□□□□□ -0.214e-7■■■□□ 17.6
LARP4Q71RC2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.747e-7■■■□□ 17.6
LARP4Q71RC2 DTYMK-202ENST00000400770 1089 ntTSL 1 (best)14.36□□□□□ -0.117e-7■■■□□ 17.6
LARP4Q71RC2 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.77■□□□□ 0.125e-9■■■□□ 17.6
Retrieved 100 of 15,922 protein–RNA pairs in 310.6 ms