RNA–Protein interactions for RNA: ENST00000513418.1

SMAD5-208, Transcript of SMAD family member 5, humanhuman

TSL 5

Gene SMAD5, Length 523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-208ENST00000513418 AEBP2Q6ZN18 517 aaPredicted RBP15.32■□□□□ 0.04
SMAD5-208ENST00000513418 CHIC1Q5VXU3 224 aa14.72□□□□□ -0.05
SMAD5-208ENST00000513418 PHF23Q9BUL5 403 aaPredicted RBP13.06□□□□□ -0.32
SMAD5-208ENST00000513418 SENP3Q9H4L4 574 aaPredicted RBP12.97□□□□□ -0.33
SMAD5-208ENST00000513418 FOXD1Q16676 465 aa12.1□□□□□ -0.47
SMAD5-208ENST00000513418 PLPPR3Q6T4P5 718 aa11.82□□□□□ -0.52
SMAD5-208ENST00000513418 PPP6R1Q9UPN7 881 aa11.51□□□□□ -0.57
SMAD5-208ENST00000513418 POTEDQ86YR6 584 aa11.46□□□□□ -0.57
SMAD5-208ENST00000513418 ADRA2BP18089 450 aa11.43□□□□□ -0.58
SMAD5-208ENST00000513418 PIAS4Q8N2W9 510 aaPredicted RBP11.3□□□□□ -0.6
SMAD5-208ENST00000513418 MSH5O43196 834 aa11.2□□□□□ -0.62
SMAD5-208ENST00000513418 KCNA4P22459 653 aa10.6□□□□□ -0.71
SMAD5-208ENST00000513418 PPP4R3CPQ6ZMV5 832 aa10.51□□□□□ -0.73
SMAD5-208ENST00000513418 MAPK8IP2Q13387 824 aaPredicted RBP10.45□□□□□ -0.74
SMAD5-208ENST00000513418 SCAF1Q9H7N4 1312 aaKnown RBP10.4□□□□□ -0.74
SMAD5-208ENST00000513418 DMRT2Q9Y5R5 561 aa10.34□□□□□ -0.75
SMAD5-208ENST00000513418 NPM3O75607 178 aaKnown RBP10.21□□□□□ -0.77
SMAD5-208ENST00000513418 CNKSR2Q8WXI2 1034 aa10.16□□□□□ -0.78
SMAD5-208ENST00000513418 HOXD11P31277 338 aaPredicted RBP10.07□□□□□ -0.8
SMAD5-208ENST00000513418 NCBP3Q53F19 620 aaKnown RBP10.02□□□□□ -0.81
SMAD5-208ENST00000513418 RNF216Q9NWF9 866 aaPredicted RBP10.02□□□□□ -0.81
SMAD5-208ENST00000513418 EHMT2Q96KQ7 1210 aa9.99□□□□□ -0.81
SMAD5-208ENST00000513418 SLC4A1APQ9BWU0 796 aaKnown RBP9.95□□□□□ -0.82
SMAD5-208ENST00000513418 ZBTB22O15209 634 aa9.9□□□□□ -0.82
SMAD5-208ENST00000513418 CSRNP3Q8WYN3 585 aa9.84□□□□□ -0.83
SMAD5-208ENST00000513418 DCAF8L1A6NGE4 600 aa9.79□□□□□ -0.84
SMAD5-208ENST00000513418 CACNB1Q02641 598 aaPredicted RBP9.76□□□□□ -0.85
SMAD5-208ENST00000513418 DNAJC5BQ9UF47 199 aa9.75□□□□□ -0.85
SMAD5-208ENST00000513418 SLC4A2P04920 1241 aa9.69□□□□□ -0.86
SMAD5-208ENST00000513418 RNF39Q9H2S5 420 aa9.62□□□□□ -0.87
SMAD5-208ENST00000513418 FOXD4L1Q9NU39 408 aa9.51□□□□□ -0.89
SMAD5-208ENST00000513418 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.5□□□□□ -0.89
SMAD5-208ENST00000513418 C1QBPQ07021 282 aaKnown RBP9.46□□□□□ -0.9
SMAD5-208ENST00000513418 U3KPZ7 1027 aaPredicted RBP9.39□□□□□ -0.91
SMAD5-208ENST00000513418 ATF5Q9Y2D1 282 aaPredicted RBP9.34□□□□□ -0.91
SMAD5-208ENST00000513418 MYCNP04198 464 aaPredicted RBP9.25□□□□□ -0.93
SMAD5-208ENST00000513418 SPINK5Q9NQ38 1064 aaPredicted RBP9.18□□□□□ -0.94
SMAD5-208ENST00000513418 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.13□□□□□ -0.95
SMAD5-208ENST00000513418 HNRNPUL2Q1KMD3 747 aaKnown RBP9.13□□□□□ -0.95
SMAD5-208ENST00000513418 SAMD1Q6SPF0 538 aaPredicted RBP9.1□□□□□ -0.95
SMAD5-208ENST00000513418 CAPN15O75808 1086 aa9.09□□□□□ -0.95
SMAD5-208ENST00000513418 DSG3P32926 999 aa9.07□□□□□ -0.96
SMAD5-208ENST00000513418 APLP2Q06481 763 aa9.07□□□□□ -0.96
SMAD5-208ENST00000513418 ATXN8OSP0DMR3 200 aa9.04□□□□□ -0.96
SMAD5-208ENST00000513418 ZNF219Q9P2Y4 722 aaPredicted RBP9.02□□□□□ -0.97
SMAD5-208ENST00000513418 TRHP20396 242 aaPredicted RBP9□□□□□ -0.97
SMAD5-208ENST00000513418 ABCB7O75027 752 aa8.92□□□□□ -0.98
SMAD5-208ENST00000513418 POTEHQ6S545 545 aa8.92□□□□□ -0.98
SMAD5-208ENST00000513418 MKRN4PQ13434 485 aaPredicted RBP8.89□□□□□ -0.99
SMAD5-208ENST00000513418 POLA2Q14181 598 aa8.83□□□□□ -1
SMAD5-208ENST00000513418 FKBP8Q14318 412 aa8.77□□□□□ -1.01
SMAD5-208ENST00000513418 ZBTB12Q9Y330 459 aaPredicted RBP8.65□□□□□ -1.02
SMAD5-208ENST00000513418 RBM42Q9BTD8 480 aaKnown RBP8.59□□□□□ -1.03
SMAD5-208ENST00000513418 OSCARQ8IYS5 282 aa8.57□□□□□ -1.04
SMAD5-208ENST00000513418 SPDYE4A6NLX3 237 aa8.54□□□□□ -1.04
SMAD5-208ENST00000513418 PROM2Q8N271 834 aa8.52□□□□□ -1.05
SMAD5-208ENST00000513418 FBLN2P98095 1184 aa8.51□□□□□ -1.05
SMAD5-208ENST00000513418 AKT1S1Q96B36 256 aa8.47□□□□□ -1.05
SMAD5-208ENST00000513418 SPDYE2BA6NHP3 402 aa8.43□□□□□ -1.06
SMAD5-208ENST00000513418 SPDYE6P0CI01 402 aa8.43□□□□□ -1.06
SMAD5-208ENST00000513418 SPDYE2Q495Y8 402 aa8.43□□□□□ -1.06
SMAD5-208ENST00000513418 RTN4Q9NQC3 1192 aaKnown RBP8.4□□□□□ -1.06
SMAD5-208ENST00000513418 REM2Q8IYK8 340 aaPredicted RBP8.39□□□□□ -1.07
SMAD5-208ENST00000513418 SSUH2Q9Y2M2 353 aa8.39□□□□□ -1.07
SMAD5-208ENST00000513418 CHRDL2Q6WN34 429 aa8.34□□□□□ -1.07
SMAD5-208ENST00000513418 ZNF692Q9BU19 519 aaPredicted RBP8.34□□□□□ -1.07
SMAD5-208ENST00000513418 PABPN1Q86U42 306 aaKnown RBP eCLIP8.31□□□□□ -1.08
SMAD5-208ENST00000513418 PITPNM1O00562 1244 aa8.3□□□□□ -1.08
SMAD5-208ENST00000513418 IFNLR1Q8IU57 520 aaPredicted RBP8.28□□□□□ -1.08
SMAD5-208ENST00000513418 VASPP50552 380 aaPredicted RBP8.26□□□□□ -1.09
SMAD5-208ENST00000513418 FXR2P51116 673 aaKnown RBP eCLIP8.22□□□□□ -1.09
SMAD5-208ENST00000513418 PIP4P2Q8N4L2 257 aa8.21□□□□□ -1.1
SMAD5-208ENST00000513418 SPDYE1Q8NFV5 336 aaPredicted RBP8.21□□□□□ -1.1
SMAD5-208ENST00000513418 SP7Q8TDD2 431 aaPredicted RBP8.17□□□□□ -1.1
SMAD5-208ENST00000513418 CLEC11AQ9Y240 323 aa8.15□□□□□ -1.1
SMAD5-208ENST00000513418 FBXO3Q9UK99 471 aa8.13□□□□□ -1.11
SMAD5-208ENST00000513418 AMER1Q5JTC6 1135 aaPredicted RBP8.1□□□□□ -1.11
SMAD5-208ENST00000513418 PKD2Q13563 968 aa8.09□□□□□ -1.11
SMAD5-208ENST00000513418 PRR29P0C7W0 189 aa8.07□□□□□ -1.12
SMAD5-208ENST00000513418 MNX1P50219 401 aaPredicted RBP8.07□□□□□ -1.12
SMAD5-208ENST00000513418 PRKAR2AP13861 404 aaKnown RBP8.06□□□□□ -1.12
SMAD5-208ENST00000513418 CREBZFQ9NS37 354 aa8.06□□□□□ -1.12
SMAD5-208ENST00000513418 STAG3Q9UJ98 1225 aa8.04□□□□□ -1.12
SMAD5-208ENST00000513418 CHADLQ6NUI6 762 aa8.03□□□□□ -1.12
SMAD5-208ENST00000513418 MIER1Q8N108 512 aa8.02□□□□□ -1.13
SMAD5-208ENST00000513418 PLCD3Q8N3E9 789 aa7.99□□□□□ -1.13
SMAD5-208ENST00000513418 HAX1O00165 279 aa7.97□□□□□ -1.13
SMAD5-208ENST00000513418 NUBP1P53384 320 aa7.95□□□□□ -1.14
SMAD5-208ENST00000513418 EVX2Q03828 476 aa7.95□□□□□ -1.14
SMAD5-208ENST00000513418 KLHL34Q8N239 644 aa7.95□□□□□ -1.14
SMAD5-208ENST00000513418 SPOCK2Q92563 424 aa7.95□□□□□ -1.14
SMAD5-208ENST00000513418 C19orf67A6NJJ6 358 aa7.94□□□□□ -1.14
SMAD5-208ENST00000513418 RASEFQ8IZ41 740 aa7.93□□□□□ -1.14
SMAD5-208ENST00000513418 FARP1Q9Y4F1 1045 aaPredicted RBP7.93□□□□□ -1.14
SMAD5-208ENST00000513418 RGL2O15211 777 aa7.91□□□□□ -1.14
SMAD5-208ENST00000513418 RNF25Q96BH1 459 aaPredicted RBP7.91□□□□□ -1.14
SMAD5-208ENST00000513418 NPM1P06748 294 aaKnown RBP eCLIP7.9□□□□□ -1.14
SMAD5-208ENST00000513418 ECM2O94769 699 aaPredicted RBP7.82□□□□□ -1.16
SMAD5-208ENST00000513418 CIZ1Q9ULV3 898 aaPredicted RBP7.82□□□□□ -1.16
SMAD5-208ENST00000513418 CD44P16070 742 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms