Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIST2H3AQ71DI3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIST2H3AQ71DI3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.04■□□□□ 0.48
HIST2H3AQ71DI3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.04■□□□□ 0.48
HIST2H3AQ71DI3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIST2H3AQ71DI3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIST2H3AQ71DI3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.04■□□□□ 0.48
HIST2H3AQ71DI3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.04■□□□□ 0.48
HIST2H3AQ71DI3 AC091799.1-201ENST00000422823 811 ntBASIC18.04■□□□□ 0.48
HIST2H3AQ71DI3 AC026271.2-201ENST00000428091 497 ntBASIC18.04■□□□□ 0.48
HIST2H3AQ71DI3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.04■□□□□ 0.48
HIST2H3AQ71DI3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.04■□□□□ 0.48
HIST2H3AQ71DI3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HIST2H3AQ71DI3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HIST2H3AQ71DI3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIST2H3AQ71DI3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIST2H3AQ71DI3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIST2H3AQ71DI3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIST2H3AQ71DI3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIST2H3AQ71DI3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HIST2H3AQ71DI3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIST2H3AQ71DI3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HIST2H3AQ71DI3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.04■□□□□ 0.48
HIST2H3AQ71DI3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HIST2H3AQ71DI3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HIST2H3AQ71DI3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.03■□□□□ 0.48
HIST2H3AQ71DI3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HIST2H3AQ71DI3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HIST2H3AQ71DI3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
HIST2H3AQ71DI3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HIST2H3AQ71DI3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.03■□□□□ 0.48
HIST2H3AQ71DI3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HIST2H3AQ71DI3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
HIST2H3AQ71DI3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.03■□□□□ 0.48
HIST2H3AQ71DI3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HIST2H3AQ71DI3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
HIST2H3AQ71DI3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.03■□□□□ 0.48
HIST2H3AQ71DI3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.03■□□□□ 0.48
HIST2H3AQ71DI3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.03■□□□□ 0.48
HIST2H3AQ71DI3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.03■□□□□ 0.48
HIST2H3AQ71DI3 UBE2DNL-204ENST00000602536 740 ntBASIC18.03■□□□□ 0.48
HIST2H3AQ71DI3 AC116050.2-201ENST00000612102 1779 ntBASIC18.03■□□□□ 0.48
HIST2H3AQ71DI3 LINC01521-201ENST00000504184 1943 ntBASIC18.03■□□□□ 0.48
HIST2H3AQ71DI3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HIST2H3AQ71DI3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.03■□□□□ 0.48
HIST2H3AQ71DI3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HIST2H3AQ71DI3 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.03■□□□□ 0.48
HIST2H3AQ71DI3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HIST2H3AQ71DI3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.02■□□□□ 0.48
HIST2H3AQ71DI3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HIST2H3AQ71DI3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
HIST2H3AQ71DI3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.02■□□□□ 0.48
HIST2H3AQ71DI3 AC027702.1-201ENST00000563810 1770 ntBASIC18.02■□□□□ 0.48
HIST2H3AQ71DI3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HIST2H3AQ71DI3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
HIST2H3AQ71DI3 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
HIST2H3AQ71DI3 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.02■□□□□ 0.48
HIST2H3AQ71DI3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HIST2H3AQ71DI3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HIST2H3AQ71DI3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.02■□□□□ 0.48
HIST2H3AQ71DI3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.02■□□□□ 0.48
HIST2H3AQ71DI3 GABARAPL3-202ENST00000624044 1851 ntBASIC18.02■□□□□ 0.48
HIST2H3AQ71DI3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HIST2H3AQ71DI3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
HIST2H3AQ71DI3 AP005212.1-201ENST00000581547 1997 ntBASIC18.02■□□□□ 0.47
HIST2H3AQ71DI3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HIST2H3AQ71DI3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
HIST2H3AQ71DI3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
HIST2H3AQ71DI3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
HIST2H3AQ71DI3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
HIST2H3AQ71DI3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.02■□□□□ 0.47
HIST2H3AQ71DI3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
HIST2H3AQ71DI3 AL157384.1-201ENST00000445995 2473 ntBASIC18.01■□□□□ 0.47
HIST2H3AQ71DI3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HIST2H3AQ71DI3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
HIST2H3AQ71DI3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
HIST2H3AQ71DI3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HIST2H3AQ71DI3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HIST2H3AQ71DI3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.01■□□□□ 0.47
HIST2H3AQ71DI3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HIST2H3AQ71DI3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HIST2H3AQ71DI3 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.01■□□□□ 0.47
HIST2H3AQ71DI3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
HIST2H3AQ71DI3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.01■□□□□ 0.47
HIST2H3AQ71DI3 MYCNOS-205ENST00000641950 531 ntBASIC18.01■□□□□ 0.47
HIST2H3AQ71DI3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HIST2H3AQ71DI3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HIST2H3AQ71DI3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
HIST2H3AQ71DI3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HIST2H3AQ71DI3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HIST2H3AQ71DI3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18■□□□□ 0.47
HIST2H3AQ71DI3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18■□□□□ 0.47
HIST2H3AQ71DI3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18■□□□□ 0.47
HIST2H3AQ71DI3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18■□□□□ 0.47
HIST2H3AQ71DI3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
HIST2H3AQ71DI3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18■□□□□ 0.47
HIST2H3AQ71DI3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
HIST2H3AQ71DI3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18■□□□□ 0.47
HIST2H3AQ71DI3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HIST2H3AQ71DI3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms