Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00575Q6W349 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00575Q6W349 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
LINC00575Q6W349 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00575Q6W349 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
LINC00575Q6W349 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00575Q6W349 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC13.03□□□□□ -0.32
LINC00575Q6W349 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC13.03□□□□□ -0.32
LINC00575Q6W349 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00575Q6W349 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
LINC00575Q6W349 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00575Q6W349 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00575Q6W349 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00575Q6W349 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00575Q6W349 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC13.03□□□□□ -0.32
LINC00575Q6W349 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC13.02□□□□□ -0.32
LINC00575Q6W349 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00575Q6W349 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC13.02□□□□□ -0.32
LINC00575Q6W349 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
LINC00575Q6W349 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC13.02□□□□□ -0.32
LINC00575Q6W349 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC13.02□□□□□ -0.32
LINC00575Q6W349 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC13.02□□□□□ -0.32
LINC00575Q6W349 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
LINC00575Q6W349 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00575Q6W349 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00575Q6W349 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00575Q6W349 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00575Q6W349 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
LINC00575Q6W349 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00575Q6W349 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00575Q6W349 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00575Q6W349 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00575Q6W349 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC13.02□□□□□ -0.33
LINC00575Q6W349 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00575Q6W349 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00575Q6W349 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC13.02□□□□□ -0.33
LINC00575Q6W349 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00575Q6W349 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC13.02□□□□□ -0.33
LINC00575Q6W349 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
LINC00575Q6W349 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
LINC00575Q6W349 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC13.01□□□□□ -0.33
LINC00575Q6W349 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
LINC00575Q6W349 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00575Q6W349 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00575Q6W349 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
LINC00575Q6W349 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00575Q6W349 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00575Q6W349 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00575Q6W349 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
LINC00575Q6W349 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
LINC00575Q6W349 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00575Q6W349 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00575Q6W349 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC13.01□□□□□ -0.33
LINC00575Q6W349 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC13.01□□□□□ -0.33
LINC00575Q6W349 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC13.01□□□□□ -0.33
LINC00575Q6W349 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00575Q6W349 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC13.01□□□□□ -0.33
LINC00575Q6W349 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00575Q6W349 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
LINC00575Q6W349 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00575Q6W349 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00575Q6W349 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00575Q6W349 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC13□□□□□ -0.33
LINC00575Q6W349 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00575Q6W349 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC00575Q6W349 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC13□□□□□ -0.33
LINC00575Q6W349 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC13□□□□□ -0.33
LINC00575Q6W349 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC13□□□□□ -0.33
LINC00575Q6W349 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC13□□□□□ -0.33
LINC00575Q6W349 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC00575Q6W349 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC00575Q6W349 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00575Q6W349 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC13□□□□□ -0.33
LINC00575Q6W349 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00575Q6W349 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC00575Q6W349 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00575Q6W349 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
LINC00575Q6W349 AP006587.3-201ENST00000525742 1516 ntBASIC13□□□□□ -0.33
LINC00575Q6W349 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00575Q6W349 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC13□□□□□ -0.33
LINC00575Q6W349 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC00575Q6W349 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
LINC00575Q6W349 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC13□□□□□ -0.33
LINC00575Q6W349 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC13□□□□□ -0.33
LINC00575Q6W349 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00575Q6W349 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC00575Q6W349 AC004408.2-201ENST00000623613 2777 ntBASIC13□□□□□ -0.33
LINC00575Q6W349 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00575Q6W349 HCG11-201ENST00000411553 5696 ntBASIC13□□□□□ -0.33
LINC00575Q6W349 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC13□□□□□ -0.33
LINC00575Q6W349 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00575Q6W349 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00575Q6W349 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC00575Q6W349 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00575Q6W349 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00575Q6W349 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
LINC00575Q6W349 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC12.99□□□□□ -0.33
LINC00575Q6W349 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00575Q6W349 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00575Q6W349 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms