Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
C11orf88Q6PI97 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
C11orf88Q6PI97 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.82■□□□□ 0.44
C11orf88Q6PI97 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.82■□□□□ 0.44
C11orf88Q6PI97 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.82■□□□□ 0.44
C11orf88Q6PI97 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.82■□□□□ 0.44
C11orf88Q6PI97 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
C11orf88Q6PI97 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
C11orf88Q6PI97 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
C11orf88Q6PI97 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.82■□□□□ 0.44
C11orf88Q6PI97 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
C11orf88Q6PI97 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
C11orf88Q6PI97 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
C11orf88Q6PI97 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
C11orf88Q6PI97 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
C11orf88Q6PI97 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
C11orf88Q6PI97 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
C11orf88Q6PI97 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
C11orf88Q6PI97 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
C11orf88Q6PI97 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
C11orf88Q6PI97 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
C11orf88Q6PI97 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.81■□□□□ 0.44
C11orf88Q6PI97 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
C11orf88Q6PI97 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
C11orf88Q6PI97 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
C11orf88Q6PI97 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
C11orf88Q6PI97 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.81■□□□□ 0.44
C11orf88Q6PI97 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
C11orf88Q6PI97 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
C11orf88Q6PI97 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
C11orf88Q6PI97 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
C11orf88Q6PI97 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.81■□□□□ 0.44
C11orf88Q6PI97 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.81■□□□□ 0.44
C11orf88Q6PI97 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
C11orf88Q6PI97 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
C11orf88Q6PI97 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.81■□□□□ 0.44
C11orf88Q6PI97 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.81■□□□□ 0.44
C11orf88Q6PI97 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
C11orf88Q6PI97 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
C11orf88Q6PI97 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.81■□□□□ 0.44
C11orf88Q6PI97 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
C11orf88Q6PI97 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
C11orf88Q6PI97 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
C11orf88Q6PI97 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.8■□□□□ 0.44
C11orf88Q6PI97 GABARAPL3-202ENST00000624044 1851 ntBASIC17.8■□□□□ 0.44
C11orf88Q6PI97 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
C11orf88Q6PI97 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
C11orf88Q6PI97 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.8■□□□□ 0.44
C11orf88Q6PI97 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
C11orf88Q6PI97 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
C11orf88Q6PI97 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.8■□□□□ 0.44
C11orf88Q6PI97 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.8■□□□□ 0.44
C11orf88Q6PI97 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.8■□□□□ 0.44
C11orf88Q6PI97 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.8■□□□□ 0.44
C11orf88Q6PI97 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.8■□□□□ 0.44
C11orf88Q6PI97 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
C11orf88Q6PI97 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
C11orf88Q6PI97 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
C11orf88Q6PI97 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
C11orf88Q6PI97 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
C11orf88Q6PI97 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.8■□□□□ 0.44
C11orf88Q6PI97 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
C11orf88Q6PI97 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.79■□□□□ 0.44
C11orf88Q6PI97 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
C11orf88Q6PI97 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
C11orf88Q6PI97 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
C11orf88Q6PI97 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
C11orf88Q6PI97 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.79■□□□□ 0.44
C11orf88Q6PI97 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
C11orf88Q6PI97 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
C11orf88Q6PI97 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.79■□□□□ 0.44
C11orf88Q6PI97 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
C11orf88Q6PI97 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
C11orf88Q6PI97 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.79■□□□□ 0.44
C11orf88Q6PI97 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
C11orf88Q6PI97 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.79■□□□□ 0.44
C11orf88Q6PI97 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
C11orf88Q6PI97 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.79■□□□□ 0.44
C11orf88Q6PI97 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
C11orf88Q6PI97 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.79■□□□□ 0.44
C11orf88Q6PI97 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
C11orf88Q6PI97 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
C11orf88Q6PI97 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
C11orf88Q6PI97 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
C11orf88Q6PI97 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
C11orf88Q6PI97 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
C11orf88Q6PI97 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
C11orf88Q6PI97 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
C11orf88Q6PI97 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.78■□□□□ 0.44
C11orf88Q6PI97 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
C11orf88Q6PI97 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
C11orf88Q6PI97 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
C11orf88Q6PI97 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.78■□□□□ 0.44
C11orf88Q6PI97 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.78■□□□□ 0.44
C11orf88Q6PI97 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.78■□□□□ 0.44
C11orf88Q6PI97 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
C11orf88Q6PI97 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
C11orf88Q6PI97 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
C11orf88Q6PI97 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.78■□□□□ 0.44
C11orf88Q6PI97 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms