Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.24■□□□□ 0.83
RIF1Q5UIP0 AC006011.2-201ENST00000621313 1158 ntBASIC20.24■□□□□ 0.83
RIF1Q5UIP0 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
RIF1Q5UIP0 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RIF1Q5UIP0 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.24■□□□□ 0.83
RIF1Q5UIP0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.24■□□□□ 0.83
RIF1Q5UIP0 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RIF1Q5UIP0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.24■□□□□ 0.83
RIF1Q5UIP0 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RIF1Q5UIP0 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RIF1Q5UIP0 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
RIF1Q5UIP0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.23■□□□□ 0.83
RIF1Q5UIP0 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.23■□□□□ 0.83
RIF1Q5UIP0 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.23■□□□□ 0.83
RIF1Q5UIP0 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.23■□□□□ 0.83
RIF1Q5UIP0 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.23■□□□□ 0.83
RIF1Q5UIP0 CLEC4GP1-201ENST00000596555 870 ntBASIC20.23■□□□□ 0.83
RIF1Q5UIP0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RIF1Q5UIP0 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.23■□□□□ 0.83
RIF1Q5UIP0 MIR1238-201ENST00000408483 83 ntBASIC20.22■□□□□ 0.83
RIF1Q5UIP0 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RIF1Q5UIP0 AC022616.7-201ENST00000525383 220 ntBASIC20.22■□□□□ 0.83
RIF1Q5UIP0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.22■□□□□ 0.83
RIF1Q5UIP0 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.22■□□□□ 0.83
RIF1Q5UIP0 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RIF1Q5UIP0 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RIF1Q5UIP0 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RIF1Q5UIP0 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RIF1Q5UIP0 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.22■□□□□ 0.83
RIF1Q5UIP0 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RIF1Q5UIP0 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RIF1Q5UIP0 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RIF1Q5UIP0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RIF1Q5UIP0 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RIF1Q5UIP0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RIF1Q5UIP0 AC138932.3-201ENST00000567634 1902 ntBASIC20.22■□□□□ 0.83
RIF1Q5UIP0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RIF1Q5UIP0 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RIF1Q5UIP0 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.21■□□□□ 0.83
RIF1Q5UIP0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.21■□□□□ 0.83
RIF1Q5UIP0 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RIF1Q5UIP0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
RIF1Q5UIP0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.21■□□□□ 0.83
RIF1Q5UIP0 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RIF1Q5UIP0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RIF1Q5UIP0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RIF1Q5UIP0 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
RIF1Q5UIP0 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RIF1Q5UIP0 AC116562.2-201ENST00000507042 360 ntBASIC20.21■□□□□ 0.83
RIF1Q5UIP0 LINC01238-205ENST00000567549 1107 ntBASIC20.21■□□□□ 0.83
RIF1Q5UIP0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RIF1Q5UIP0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.21■□□□□ 0.83
RIF1Q5UIP0 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.21■□□□□ 0.83
RIF1Q5UIP0 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RIF1Q5UIP0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RIF1Q5UIP0 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RIF1Q5UIP0 AP000593.1-201ENST00000393668 712 ntBASIC20.2■□□□□ 0.82
RIF1Q5UIP0 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.2■□□□□ 0.82
RIF1Q5UIP0 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.2■□□□□ 0.82
RIF1Q5UIP0 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RIF1Q5UIP0 HTR7P1-201ENST00000538670 1336 ntBASIC20.2■□□□□ 0.82
RIF1Q5UIP0 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RIF1Q5UIP0 HCG4P8-203ENST00000443049 980 ntBASIC20.2■□□□□ 0.82
RIF1Q5UIP0 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.2■□□□□ 0.82
RIF1Q5UIP0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.2■□□□□ 0.82
RIF1Q5UIP0 AC006538.3-201ENST00000612495 578 ntBASIC20.2■□□□□ 0.82
RIF1Q5UIP0 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RIF1Q5UIP0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.2■□□□□ 0.82
RIF1Q5UIP0 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
RIF1Q5UIP0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
RIF1Q5UIP0 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RIF1Q5UIP0 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.19■□□□□ 0.82
RIF1Q5UIP0 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RIF1Q5UIP0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
RIF1Q5UIP0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.19■□□□□ 0.82
RIF1Q5UIP0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RIF1Q5UIP0 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
RIF1Q5UIP0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.19■□□□□ 0.82
RIF1Q5UIP0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.19■□□□□ 0.82
RIF1Q5UIP0 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RIF1Q5UIP0 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RIF1Q5UIP0 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.18■□□□□ 0.82
RIF1Q5UIP0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
RIF1Q5UIP0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.18■□□□□ 0.82
RIF1Q5UIP0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RIF1Q5UIP0 FAM8A6P-201ENST00000407496 1135 ntBASIC20.18■□□□□ 0.82
RIF1Q5UIP0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.18■□□□□ 0.82
RIF1Q5UIP0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.18■□□□□ 0.82
RIF1Q5UIP0 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RIF1Q5UIP0 AC007322.3-201ENST00000426526 701 ntBASIC20.17■□□□□ 0.82
RIF1Q5UIP0 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.17■□□□□ 0.82
RIF1Q5UIP0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RIF1Q5UIP0 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RIF1Q5UIP0 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RIF1Q5UIP0 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.17■□□□□ 0.82
RIF1Q5UIP0 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RIF1Q5UIP0 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.17■□□□□ 0.82
RIF1Q5UIP0 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.17■□□□□ 0.82
RIF1Q5UIP0 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.17■□□□□ 0.82
RIF1Q5UIP0 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms