Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RSPO4Q2I0M5 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.08■□□□□ 0.81
RSPO4Q2I0M5 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.08■□□□□ 0.81
RSPO4Q2I0M5 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.08■□□□□ 0.81
RSPO4Q2I0M5 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.08■□□□□ 0.81
RSPO4Q2I0M5 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.08■□□□□ 0.81
RSPO4Q2I0M5 AC105020.6-201ENST00000621523 1217 ntBASIC20.08■□□□□ 0.81
RSPO4Q2I0M5 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
RSPO4Q2I0M5 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.08■□□□□ 0.8
RSPO4Q2I0M5 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.08■□□□□ 0.8
RSPO4Q2I0M5 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RSPO4Q2I0M5 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RSPO4Q2I0M5 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
RSPO4Q2I0M5 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RSPO4Q2I0M5 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RSPO4Q2I0M5 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RSPO4Q2I0M5 HTR7P1-201ENST00000538670 1336 ntBASIC20.07■□□□□ 0.8
RSPO4Q2I0M5 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.07■□□□□ 0.8
RSPO4Q2I0M5 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.07■□□□□ 0.8
RSPO4Q2I0M5 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RSPO4Q2I0M5 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RSPO4Q2I0M5 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RSPO4Q2I0M5 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RSPO4Q2I0M5 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RSPO4Q2I0M5 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RSPO4Q2I0M5 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
RSPO4Q2I0M5 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RSPO4Q2I0M5 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.07■□□□□ 0.8
RSPO4Q2I0M5 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.07■□□□□ 0.8
RSPO4Q2I0M5 AL031963.3-201ENST00000606441 850 ntBASIC20.07■□□□□ 0.8
RSPO4Q2I0M5 AL358472.4-201ENST00000633140 710 ntBASIC20.07■□□□□ 0.8
RSPO4Q2I0M5 AC087633.2-202ENST00000565166 1439 ntBASIC20.07■□□□□ 0.8
RSPO4Q2I0M5 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RSPO4Q2I0M5 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.07■□□□□ 0.8
RSPO4Q2I0M5 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RSPO4Q2I0M5 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
RSPO4Q2I0M5 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.06■□□□□ 0.8
RSPO4Q2I0M5 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RSPO4Q2I0M5 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RSPO4Q2I0M5 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RSPO4Q2I0M5 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.06■□□□□ 0.8
RSPO4Q2I0M5 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.06■□□□□ 0.8
RSPO4Q2I0M5 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.06■□□□□ 0.8
RSPO4Q2I0M5 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.06■□□□□ 0.8
RSPO4Q2I0M5 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.06■□□□□ 0.8
RSPO4Q2I0M5 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.06■□□□□ 0.8
RSPO4Q2I0M5 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.06■□□□□ 0.8
RSPO4Q2I0M5 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.06■□□□□ 0.8
RSPO4Q2I0M5 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RSPO4Q2I0M5 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.06■□□□□ 0.8
RSPO4Q2I0M5 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
RSPO4Q2I0M5 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.05■□□□□ 0.8
RSPO4Q2I0M5 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RSPO4Q2I0M5 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
RSPO4Q2I0M5 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RSPO4Q2I0M5 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.05■□□□□ 0.8
RSPO4Q2I0M5 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RSPO4Q2I0M5 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RSPO4Q2I0M5 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RSPO4Q2I0M5 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.05■□□□□ 0.8
RSPO4Q2I0M5 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
RSPO4Q2I0M5 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
RSPO4Q2I0M5 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RSPO4Q2I0M5 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RSPO4Q2I0M5 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RSPO4Q2I0M5 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RSPO4Q2I0M5 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RSPO4Q2I0M5 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RSPO4Q2I0M5 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RSPO4Q2I0M5 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RSPO4Q2I0M5 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RSPO4Q2I0M5 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RSPO4Q2I0M5 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RSPO4Q2I0M5 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.04■□□□□ 0.8
RSPO4Q2I0M5 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.04■□□□□ 0.8
RSPO4Q2I0M5 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RSPO4Q2I0M5 KRT18P48-201ENST00000434763 852 ntBASIC20.04■□□□□ 0.8
RSPO4Q2I0M5 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
RSPO4Q2I0M5 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.04■□□□□ 0.8
RSPO4Q2I0M5 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.04■□□□□ 0.8
RSPO4Q2I0M5 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.04■□□□□ 0.8
RSPO4Q2I0M5 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RSPO4Q2I0M5 CYP2D8P-201ENST00000433633 1490 ntBASIC20.04■□□□□ 0.8
RSPO4Q2I0M5 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RSPO4Q2I0M5 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RSPO4Q2I0M5 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.04■□□□□ 0.8
RSPO4Q2I0M5 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RSPO4Q2I0M5 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RSPO4Q2I0M5 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.03■□□□□ 0.8
RSPO4Q2I0M5 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RSPO4Q2I0M5 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RSPO4Q2I0M5 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RSPO4Q2I0M5 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.03■□□□□ 0.8
RSPO4Q2I0M5 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.03■□□□□ 0.8
RSPO4Q2I0M5 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RSPO4Q2I0M5 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.03■□□□□ 0.8
RSPO4Q2I0M5 AC005829.2-201ENST00000571422 1056 ntBASIC20.03■□□□□ 0.8
RSPO4Q2I0M5 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RSPO4Q2I0M5 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RSPO4Q2I0M5 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms