Protein–RNA interactions for Protein: Q01560

NPL3, Nucleolar protein 3, yeastyeast

Known RBP RIP-Chip data

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NPL3Q01560 SDH7YDR511W 402 nt3.61□□□□□ -1.83
NPL3Q01560 RRT13YER066W 558 nt3.61□□□□□ -1.83
NPL3Q01560 YER107W-AYER107W-A 321 nt3.61□□□□□ -1.83
NPL3Q01560 YGR107WYGR107W 450 nt3.61□□□□□ -1.83
NPL3Q01560 YHR007C-AYHR007C-A 216 nt3.61□□□□□ -1.83
NPL3Q01560 SIP18YMR175W 240 nt3.61□□□□□ -1.83
NPL3Q01560 YPR039WYPR039W 336 nt3.61□□□□□ -1.83
NPL3Q01560 SPA2YLL021W 4401 nt3.6□□□□□ -1.83
NPL3Q01560 GNT1YOR320C 1476 nt3.6□□□□□ -1.83
NPL3Q01560 BIT61YJL058C 1632 nt3.6□□□□□ -1.83
NPL3Q01560 TIF35YDR429C 825 nt3.6□□□□□ -1.83
NPL3Q01560 YFL032WYFL032W 321 nt3.6□□□□□ -1.83
NPL3Q01560 RPS23AYGR118W 438 nt3.6□□□□□ -1.83
NPL3Q01560 ERP4YOR016C 624 nt3.6□□□□□ -1.83
NPL3Q01560 DGK1YOR311C 873 nt3.6□□□□□ -1.83
NPL3Q01560 VPS3YDR495C 3036 nt3.6□□□□□ -1.83
NPL3Q01560 ETP1YHL010C 1758 nt3.6□□□□□ -1.83
NPL3Q01560 SIZ1YDR409W 2715 nt3.6□□□□□ -1.83
NPL3Q01560 CDC45YLR103C 1953 nt3.6□□□□□ -1.83
NPL3Q01560 RRN6YBL014C 2685 nt3.59□□□□□ -1.83
NPL3Q01560 RSC1YGR056W 2787 nt3.59□□□□□ -1.83
NPL3Q01560 DAN4YJR151C 3486 nt3.59□□□□□ -1.83
NPL3Q01560 KRE5YOR336W 4098 nt3.59□□□□□ -1.83
NPL3Q01560 MYO3YKL129C 3819 nt3.59□□□□□ -1.83 RIP-Chip
NPL3Q01560 PAU23YLR037C 375 nt3.59□□□□□ -1.83
NPL3Q01560 ICY1YMR195W 384 nt3.59□□□□□ -1.83 RIP-Chip
NPL3Q01560 YMR290W-AYMR290W-A 348 nt3.59□□□□□ -1.83
NPL3Q01560 ZEO1YOL109W 342 nt3.59□□□□□ -1.83
NPL3Q01560 YPL276WYPL276W 438 nt3.59□□□□□ -1.83
NPL3Q01560 YDR034C-DYDR034C-D 5313 nt3.59□□□□□ -1.83
NPL3Q01560 GPI13YLL031C 3054 nt3.59□□□□□ -1.84
NPL3Q01560 VPS53YJL029C 2469 nt3.58□□□□□ -1.84
NPL3Q01560 ERG28YER044C 447 nt3.58□□□□□ -1.84 RIP-Chip
NPL3Q01560 YGR069WYGR069W 336 nt3.58□□□□□ -1.84
NPL3Q01560 GEP4YHR100C 558 nt3.58□□□□□ -1.84
NPL3Q01560 RPL37AYLR185W 267 nt3.58□□□□□ -1.84 RIP-Chip
NPL3Q01560 VTI1YMR197C 654 nt3.58□□□□□ -1.84
NPL3Q01560 RPB11YOL005C 363 nt3.58□□□□□ -1.84 RIP-Chip
NPL3Q01560 ATP3YBR039W 936 nt3.58□□□□□ -1.84 RIP-Chip
NPL3Q01560 ZDS2YML109W 2829 nt3.58□□□□□ -1.84
NPL3Q01560 VHR2YER064C 1518 nt3.58□□□□□ -1.84
NPL3Q01560 ROY1YMR258C 1662 nt3.58□□□□□ -1.84
NPL3Q01560 TFB1YDR311W 1929 nt3.58□□□□□ -1.84
NPL3Q01560 PMT6YGR199W 2280 nt3.58□□□□□ -1.84
NPL3Q01560 TRZ1YKR079C 2517 nt3.58□□□□□ -1.84
NPL3Q01560 RPN2YIL075C 2838 nt3.57□□□□□ -1.84
NPL3Q01560 YHR214W-AYHR214W-A 486 nt3.57□□□□□ -1.84
NPL3Q01560 RPS24BYIL069C 408 nt3.57□□□□□ -1.84
NPL3Q01560 TMA19YKL056C 504 nt3.57□□□□□ -1.84
NPL3Q01560 OSH6YKR003W 1347 nt3.57□□□□□ -1.84
NPL3Q01560 YAR068WYAR068W 486 nt3.57□□□□□ -1.84
NPL3Q01560 YMR294W-AYMR294W-A 360 nt3.57□□□□□ -1.84
NPL3Q01560 ISU1YPL135W 498 nt3.57□□□□□ -1.84 RIP-Chip
NPL3Q01560 TIM12YBR091C 330 nt3.57□□□□□ -1.84 RIP-Chip
NPL3Q01560 SPT10YJL127C 1923 nt3.56□□□□□ -1.84
NPL3Q01560 IRC4YDR540C 540 nt3.56□□□□□ -1.84
NPL3Q01560 SPT4YGR063C 309 nt3.56□□□□□ -1.84 RIP-Chip
NPL3Q01560 COX23YHR116W 456 nt3.56□□□□□ -1.84
NPL3Q01560 BLI1YKL061W 342 nt3.56□□□□□ -1.84
NPL3Q01560 snR13snR13 124 nt3.56□□□□□ -1.84
NPL3Q01560 SLM6YBR266C 453 nt3.56□□□□□ -1.84
NPL3Q01560 NIC96YFR002W 2520 nt3.56□□□□□ -1.84
NPL3Q01560 RAD5YLR032W 3510 nt3.56□□□□□ -1.84 RIP-Chip
NPL3Q01560 SNF12YNR023W 1701 nt3.56□□□□□ -1.84
NPL3Q01560 YJR023CYJR023C 402 nt3.55□□□□□ -1.84
NPL3Q01560 IMP4YNL075W 873 nt3.55□□□□□ -1.84
NPL3Q01560 snR36snR36 182 nt3.55□□□□□ -1.84
NPL3Q01560 SWD3YBR175W 948 nt3.55□□□□□ -1.84
NPL3Q01560 DPB11YJL090C 2295 nt3.55□□□□□ -1.84
NPL3Q01560 SSM4YIL030C 3960 nt3.54□□□□□ -1.84
NPL3Q01560 MDM32YOR147W 1869 nt3.54□□□□□ -1.84
NPL3Q01560 YKL100CYKL100C 1764 nt3.54□□□□□ -1.84
NPL3Q01560 FMP32YFL046W 624 nt3.54□□□□□ -1.84
NPL3Q01560 YOR385WYOR385W 873 nt3.54□□□□□ -1.84 RIP-Chip
NPL3Q01560 CCT7YJL111W 1653 nt3.54□□□□□ -1.84
NPL3Q01560 LRG1YDL240W 3054 nt3.54□□□□□ -1.84
NPL3Q01560 NOP4YPL043W 2058 nt3.53□□□□□ -1.84
NPL3Q01560 NUP60YAR002W 1620 nt3.53□□□□□ -1.84
NPL3Q01560 APC11YDL008W 498 nt3.53□□□□□ -1.84 RIP-Chip
NPL3Q01560 TSA2YDR453C 591 nt3.53□□□□□ -1.84 RIP-Chip
NPL3Q01560 RMT2YDR465C 1239 nt3.53□□□□□ -1.84
NPL3Q01560 YER066C-AYER066C-A 501 nt3.53□□□□□ -1.84
NPL3Q01560 ANB1YJR047C 474 nt3.53□□□□□ -1.84
NPL3Q01560 YLR031WYLR031W 561 nt3.53□□□□□ -1.84
NPL3Q01560 YOL160WYOL160W 342 nt3.53□□□□□ -1.84
NPL3Q01560 STE5YDR103W 2754 nt3.53□□□□□ -1.84
NPL3Q01560 APE2YKL157W 2859 nt3.53□□□□□ -1.85 RIP-Chip
NPL3Q01560 TRS120YDR407C 3870 nt3.52□□□□□ -1.85
NPL3Q01560 YDR102CYDR102C 333 nt3.52□□□□□ -1.85
NPL3Q01560 ATP17YDR377W 306 nt3.52□□□□□ -1.85 RIP-Chip
NPL3Q01560 RPS21BYJL136C 264 nt3.52□□□□□ -1.85
NPL3Q01560 YJR140W-AYJR140W-A 150 nt3.52□□□□□ -1.85
NPL3Q01560 RPL19BYBL027W 570 nt3.52□□□□□ -1.85 RIP-Chip
NPL3Q01560 TIM18YOR297C 579 nt3.52□□□□□ -1.85 RIP-Chip
NPL3Q01560 snR191snR191 274 nt3.52□□□□□ -1.85
NPL3Q01560 SET1YHR119W 3243 nt3.52□□□□□ -1.85
NPL3Q01560 ATG21YPL100W 1491 nt3.52□□□□□ -1.85
NPL3Q01560 ELM1YKL048C 1923 nt3.52□□□□□ -1.85
NPL3Q01560 OSH3YHR073W 2991 nt3.51□□□□□ -1.85
NPL3Q01560 YJR003CYJR003C 1560 nt3.51□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms