Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC12.05□□□□□ -0.48
RPS28P62857 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RPS28P62857 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RPS28P62857 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RPS28P62857 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC12.04□□□□□ -0.48
RPS28P62857 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RPS28P62857 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RPS28P62857 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
RPS28P62857 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
RPS28P62857 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RPS28P62857 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RPS28P62857 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
RPS28P62857 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RPS28P62857 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RPS28P62857 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC12.04□□□□□ -0.48
RPS28P62857 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
RPS28P62857 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RPS28P62857 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RPS28P62857 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RPS28P62857 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RPS28P62857 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
RPS28P62857 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC12.04□□□□□ -0.48
RPS28P62857 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC12.04□□□□□ -0.48
RPS28P62857 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RPS28P62857 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
RPS28P62857 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RPS28P62857 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
RPS28P62857 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RPS28P62857 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
RPS28P62857 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC12.04□□□□□ -0.48
RPS28P62857 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RPS28P62857 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC12.04□□□□□ -0.48
RPS28P62857 C1R-202ENST00000536053 2347 ntTSL 2 BASIC12.04□□□□□ -0.48
RPS28P62857 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RPS28P62857 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
RPS28P62857 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RPS28P62857 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RPS28P62857 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
RPS28P62857 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC12.04□□□□□ -0.48
RPS28P62857 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC12.04□□□□□ -0.48
RPS28P62857 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RPS28P62857 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RPS28P62857 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
RPS28P62857 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
RPS28P62857 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RPS28P62857 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
RPS28P62857 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
RPS28P62857 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RPS28P62857 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC12.03□□□□□ -0.48
RPS28P62857 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
RPS28P62857 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
RPS28P62857 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RPS28P62857 PTGES2-AS1-201ENST00000443493 2100 ntBASIC12.03□□□□□ -0.48
RPS28P62857 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RPS28P62857 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RPS28P62857 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RPS28P62857 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
RPS28P62857 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RPS28P62857 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RPS28P62857 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RPS28P62857 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RPS28P62857 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RPS28P62857 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RPS28P62857 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
RPS28P62857 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RPS28P62857 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC12.02□□□□□ -0.48
RPS28P62857 SNAI3-AS1-205ENST00000568633 2096 ntBASIC12.02□□□□□ -0.48
RPS28P62857 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RPS28P62857 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC12.02□□□□□ -0.48
RPS28P62857 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RPS28P62857 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
RPS28P62857 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RPS28P62857 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC12.02□□□□□ -0.49
RPS28P62857 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
RPS28P62857 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RPS28P62857 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
RPS28P62857 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
RPS28P62857 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
RPS28P62857 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RPS28P62857 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
RPS28P62857 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RPS28P62857 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
RPS28P62857 AC005332.7-201ENST00000614046 2005 ntBASIC12.02□□□□□ -0.49
RPS28P62857 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
RPS28P62857 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RPS28P62857 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
RPS28P62857 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RPS28P62857 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RPS28P62857 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RPS28P62857 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
RPS28P62857 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
RPS28P62857 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC12.02□□□□□ -0.49
RPS28P62857 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC12.02□□□□□ -0.49
RPS28P62857 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RPS28P62857 AC073314.1-201ENST00000568729 2216 ntBASIC12.02□□□□□ -0.49
RPS28P62857 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
RPS28P62857 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
RPS28P62857 COMP-202ENST00000425807 2292 ntTSL 2 BASIC12.02□□□□□ -0.49
RPS28P62857 PWWP2AP1-201ENST00000429776 2273 ntBASIC12.02□□□□□ -0.49
RPS28P62857 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 200.2 ms