Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CLDN6P56747 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN6P56747 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN6P56747 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CLDN6P56747 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.81■□□□□ 0.76
CLDN6P56747 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN6P56747 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN6P56747 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.81■□□□□ 0.76
CLDN6P56747 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CLDN6P56747 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CLDN6P56747 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.8■□□□□ 0.76
CLDN6P56747 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CLDN6P56747 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN6P56747 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CLDN6P56747 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN6P56747 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN6P56747 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.8■□□□□ 0.76
CLDN6P56747 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.8■□□□□ 0.76
CLDN6P56747 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN6P56747 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN6P56747 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.8■□□□□ 0.76
CLDN6P56747 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CLDN6P56747 AC105020.6-201ENST00000621523 1217 ntBASIC19.8■□□□□ 0.76
CLDN6P56747 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CLDN6P56747 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN6P56747 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN6P56747 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.8■□□□□ 0.76
CLDN6P56747 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.79■□□□□ 0.76
CLDN6P56747 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.79■□□□□ 0.76
CLDN6P56747 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN6P56747 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN6P56747 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN6P56747 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN6P56747 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN6P56747 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CLDN6P56747 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN6P56747 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN6P56747 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CLDN6P56747 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN6P56747 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.79■□□□□ 0.76
CLDN6P56747 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN6P56747 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.79■□□□□ 0.76
CLDN6P56747 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.79■□□□□ 0.76
CLDN6P56747 MTDHP1-201ENST00000605323 784 ntBASIC19.79■□□□□ 0.76
CLDN6P56747 AC124016.1-201ENST00000609552 612 ntBASIC19.79■□□□□ 0.76
CLDN6P56747 AC006557.6-201ENST00000623071 864 ntBASIC19.79■□□□□ 0.76
CLDN6P56747 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN6P56747 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN6P56747 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN6P56747 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN6P56747 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN6P56747 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN6P56747 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN6P56747 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN6P56747 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.78■□□□□ 0.76
CLDN6P56747 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN6P56747 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN6P56747 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.78■□□□□ 0.76
CLDN6P56747 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.78■□□□□ 0.76
CLDN6P56747 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN6P56747 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN6P56747 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN6P56747 AC012618.2-201ENST00000428058 849 ntBASIC19.78■□□□□ 0.76
CLDN6P56747 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.78■□□□□ 0.76
CLDN6P56747 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.78■□□□□ 0.76
CLDN6P56747 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN6P56747 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.78■□□□□ 0.76
CLDN6P56747 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.78■□□□□ 0.76
CLDN6P56747 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.78■□□□□ 0.76
CLDN6P56747 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CLDN6P56747 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
CLDN6P56747 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CLDN6P56747 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN6P56747 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN6P56747 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN6P56747 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CLDN6P56747 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN6P56747 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN6P56747 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN6P56747 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN6P56747 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.77■□□□□ 0.76
CLDN6P56747 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN6P56747 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN6P56747 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CLDN6P56747 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.77■□□□□ 0.76
CLDN6P56747 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN6P56747 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.77■□□□□ 0.76
CLDN6P56747 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN6P56747 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN6P56747 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.77■□□□□ 0.76
CLDN6P56747 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.77■□□□□ 0.76
CLDN6P56747 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.77■□□□□ 0.76
CLDN6P56747 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.77■□□□□ 0.76
CLDN6P56747 AL049637.2-201ENST00000641778 930 ntBASIC19.77■□□□□ 0.76
CLDN6P56747 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CLDN6P56747 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.77■□□□□ 0.76
CLDN6P56747 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.77■□□□□ 0.76
CLDN6P56747 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CLDN6P56747 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
CLDN6P56747 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms