Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
MMP13P45452 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
MMP13P45452 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
MMP13P45452 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.36■■□□□ 1.01
MMP13P45452 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
MMP13P45452 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
MMP13P45452 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.36■■□□□ 1.01
MMP13P45452 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.36■■□□□ 1.01
MMP13P45452 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
MMP13P45452 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
MMP13P45452 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
MMP13P45452 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
MMP13P45452 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MMP13P45452 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
MMP13P45452 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MMP13P45452 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
MMP13P45452 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MMP13P45452 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MMP13P45452 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MMP13P45452 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
MMP13P45452 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
MMP13P45452 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.35■■□□□ 1.01
MMP13P45452 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.35■■□□□ 1.01
MMP13P45452 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MMP13P45452 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
MMP13P45452 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MMP13P45452 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.35■■□□□ 1.01
MMP13P45452 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.35■■□□□ 1.01
MMP13P45452 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.35■■□□□ 1.01
MMP13P45452 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MMP13P45452 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
MMP13P45452 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
MMP13P45452 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MMP13P45452 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MMP13P45452 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
MMP13P45452 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
MMP13P45452 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.35■■□□□ 1.01
MMP13P45452 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.35■■□□□ 1.01
MMP13P45452 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MMP13P45452 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MMP13P45452 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
MMP13P45452 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MMP13P45452 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
MMP13P45452 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.34■■□□□ 1.01
MMP13P45452 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.34■■□□□ 1.01
MMP13P45452 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MMP13P45452 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MMP13P45452 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MMP13P45452 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.34■■□□□ 1.01
MMP13P45452 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MMP13P45452 AC120498.10-201ENST00000621827 505 ntBASIC21.34■■□□□ 1.01
MMP13P45452 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MMP13P45452 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MMP13P45452 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
MMP13P45452 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
MMP13P45452 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.34■■□□□ 1.01
MMP13P45452 AFG3L1P-217ENST00000557444 2447 ntBASIC21.34■■□□□ 1.01
MMP13P45452 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MMP13P45452 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
MMP13P45452 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MMP13P45452 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
MMP13P45452 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
MMP13P45452 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.33■■□□□ 1.01
MMP13P45452 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
MMP13P45452 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MMP13P45452 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MMP13P45452 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MMP13P45452 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.33■■□□□ 1.01
MMP13P45452 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.33■■□□□ 1.01
MMP13P45452 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.33■■□□□ 1.01
MMP13P45452 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
MMP13P45452 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
MMP13P45452 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
MMP13P45452 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.33■■□□□ 1
MMP13P45452 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1
MMP13P45452 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
MMP13P45452 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.32■■□□□ 1
MMP13P45452 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MMP13P45452 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
MMP13P45452 AL391422.3-201ENST00000603791 2761 ntBASIC21.32■■□□□ 1
MMP13P45452 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.32■■□□□ 1
MMP13P45452 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.32■■□□□ 1
MMP13P45452 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.32■■□□□ 1
MMP13P45452 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.32■■□□□ 1
MMP13P45452 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
MMP13P45452 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MMP13P45452 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
MMP13P45452 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.32■■□□□ 1
MMP13P45452 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.32■■□□□ 1
MMP13P45452 KRT18P20-201ENST00000548986 1279 ntBASIC21.32■■□□□ 1
MMP13P45452 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.32■■□□□ 1
MMP13P45452 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MMP13P45452 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
MMP13P45452 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.32■■□□□ 1
MMP13P45452 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
MMP13P45452 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
MMP13P45452 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.31■■□□□ 1
MMP13P45452 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MMP13P45452 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.31■■□□□ 1
MMP13P45452 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms