Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 RPE-212ENST00000441588 496 ntTSL 49.78□□□□□ -0.841e-9■■■■□ 22.9
MATR3P43243 RPE-210ENST00000438204 796 ntTSL 2 BASIC9.78□□□□□ -0.841e-9■■■■□ 22.9
MATR3P43243 RPE-213ENST00000445268 668 ntTSL 5 BASIC9.78□□□□□ -0.841e-9■■■■□ 22.9
MATR3P43243 ABCB1-211ENST00000622132 4778 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.853e-6■■■■□ 22.9
MATR3P43243 RPE-207ENST00000435437 858 ntTSL 2 BASIC9.56□□□□□ -0.881e-9■■■■□ 22.9
MATR3P43243 RPE-216ENST00000454822 2130 ntTSL 2 BASIC9.55□□□□□ -0.881e-9■■■■□ 22.9
MATR3P43243 RPE-209ENST00000438191 426 ntTSL 59.54□□□□□ -0.881e-9■■■■□ 22.9
MATR3P43243 EPS15L1-214ENST00000602009 3915 ntTSL 2 BASIC9.5□□□□□ -0.893e-6■■■■□ 22.9
MATR3P43243 NDUFS4-205ENST00000507026 680 ntTSL 39.48□□□□□ -0.893e-6■■■■□ 22.9
MATR3P43243 RPE-211ENST00000438265 668 ntTSL 38.96□□□□□ -0.981e-9■■■■□ 22.9
MATR3P43243 RPE-204ENST00000411934 792 ntTSL 1 (best) BASIC8.96□□□□□ -0.981e-9■■■■□ 22.9
MATR3P43243 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.993e-6■■■■□ 22.9
MATR3P43243 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -14e-6■■■■□ 22.9
MATR3P43243 MAP4-210ENST00000439356 2743 ntTSL 1 (best) BASIC8.68□□□□□ -1.023e-6■■■■□ 22.9
MATR3P43243 SLC30A6-209ENST00000457724 570 ntTSL 48.68□□□□□ -1.023e-6■■■■□ 22.9
MATR3P43243 PRMT5-218ENST00000555454 771 ntTSL 58.66□□□□□ -1.023e-6■■■■□ 22.9
MATR3P43243 CCDC91-206ENST00000538586 471 ntTSL 48.64□□□□□ -1.032e-6■■■■□ 22.9
MATR3P43243 RPE-205ENST00000429907 925 ntTSL 2 BASIC8.62□□□□□ -1.031e-9■■■■□ 22.9
MATR3P43243 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.033e-6■■■■□ 22.9
MATR3P43243 RPE-203ENST00000408981 737 ntTSL 58.61□□□□□ -1.031e-9■■■■□ 22.9
MATR3P43243 PUM1-213ENST00000524516 561 ntTSL 28.6□□□□□ -1.031e-7■■■■□ 22.9
MATR3P43243 GPALPP1-206ENST00000497558 4294 ntTSL 58.58□□□□□ -1.043e-6■■■■□ 22.9
MATR3P43243 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC8.5□□□□□ -1.053e-6■■■■□ 22.9
MATR3P43243 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.063e-6■■■■□ 22.9
MATR3P43243 NKTR-211ENST00000468735 7964 ntTSL 28.31□□□□□ -1.083e-6■■■■□ 22.9
MATR3P43243 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.081e-6■■■■□ 22.9
MATR3P43243 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC8.25□□□□□ -1.093e-6■■■■□ 22.9
MATR3P43243 CEP170-224ENST00000523424 593 ntTSL 58.24□□□□□ -1.093e-6■■■■□ 22.9
MATR3P43243 UBR3-205ENST00000439681 2183 ntTSL 28.15□□□□□ -1.13e-6■■■■□ 22.9
MATR3P43243 MYO1E-203ENST00000558571 557 ntTSL 58.15□□□□□ -1.13e-6■■■■□ 22.9
MATR3P43243 ROCK1-207ENST00000635540 5656 ntTSL 58.01□□□□□ -1.138e-12■■■■□ 22.9
MATR3P43243 IPO11-205ENST00000424533 3005 ntTSL 27.97□□□□□ -1.133e-6■■■■□ 22.9
MATR3P43243 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.75□□□□□ -1.173e-6■■■■□ 22.9
MATR3P43243 PRMT5-207ENST00000476175 682 ntTSL 27.65□□□□□ -1.183e-6■■■■□ 22.9
MATR3P43243 AC095032.1-202ENST00000447322 470 ntTSL 37.49□□□□□ -1.213e-6■■■■□ 22.9
MATR3P43243 RALY-209ENST00000489384 227 ntTSL 37.32□□□□□ -1.243e-6■■■■□ 22.9
MATR3P43243 PRMT5-206ENST00000454731 617 ntTSL 37.16□□□□□ -1.263e-6■■■■□ 22.9
MATR3P43243 SCAPER-201ENST00000303521 5438 ntTSL 27.16□□□□□ -1.263e-6■■■■□ 22.9
MATR3P43243 RPE-215ENST00000453724 546 ntTSL 56.79□□□□□ -1.321e-9■■■■□ 22.9
MATR3P43243 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.333e-6■■■■□ 22.9
MATR3P43243 BBX-219ENST00000457496 556 ntTSL 46.67□□□□□ -1.343e-6■■■■□ 22.9
MATR3P43243 SLC30A6-206ENST00000440718 573 ntTSL 46.52□□□□□ -1.373e-6■■■■□ 22.9
MATR3P43243 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC6.27□□□□□ -1.413e-6■■■■□ 22.9
MATR3P43243 PRMT5-226ENST00000557443 337 ntTSL 36.17□□□□□ -1.423e-6■■■■□ 22.9
MATR3P43243 CCDC91-203ENST00000535520 1626 ntTSL 26.12□□□□□ -1.432e-6■■■■□ 22.9
MATR3P43243 MAP4-216ENST00000633710 570 ntTSL 55.8□□□□□ -1.483e-6■■■■□ 22.9
MATR3P43243 BBX-208ENST00000425868 550 ntTSL 45.75□□□□□ -1.493e-6■■■■□ 22.9
MATR3P43243 IPO11-212ENST00000511713 1865 ntTSL 35.51□□□□□ -1.533e-6■■■■□ 22.9
MATR3P43243 BBX-205ENST00000413213 819 ntTSL 55.4□□□□□ -1.543e-6■■■■□ 22.9
MATR3P43243 ITGA9-AS1-216ENST00000630010 575 ntTSL 55.33□□□□□ -1.563e-6■■■■□ 22.9
MATR3P43243 ITGA9-AS1-215ENST00000629314 417 ntTSL 55.33□□□□□ -1.563e-6■■■■□ 22.9
MATR3P43243 BBX-213ENST00000449213 843 ntTSL 55.33□□□□□ -1.563e-6■■■■□ 22.9
MATR3P43243 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.33□□□□□ -1.563e-6■■■■□ 22.9
MATR3P43243 ITGA9-AS1-204ENST00000430620 709 ntTSL 55.33□□□□□ -1.563e-6■■■■□ 22.9
MATR3P43243 CCDC91-216ENST00000543534 575 ntTSL 55.26□□□□□ -1.572e-6■■■■□ 22.9
MATR3P43243 RNF103-204ENST00000472030 4560 ntTSL 25.24□□□□□ -1.573e-6■■■■□ 22.9
MATR3P43243 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.15□□□□□ -1.581e-6■■■■□ 22.9
MATR3P43243 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.09□□□□□ -1.593e-6■■■■□ 22.9
MATR3P43243 IPO11-204ENST00000413749 1368 ntTSL 55.08□□□□□ -1.63e-6■■■■□ 22.9
MATR3P43243 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.04□□□□□ -1.63e-6■■■■□ 22.9
MATR3P43243 SLC30A6-208ENST00000454324 2359 ntTSL 24.78□□□□□ -1.641e-6■■■■□ 22.9
MATR3P43243 SLC30A6-207ENST00000449777 2207 ntTSL 24.69□□□□□ -1.661e-6■■■■□ 22.9
MATR3P43243 KDM6B-205ENST00000572030 432 ntTSL 34.65□□□□□ -1.673e-6■■■■□ 22.9
MATR3P43243 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.65□□□□□ -1.671e-6■■■■□ 22.9
MATR3P43243 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.45□□□□□ -1.73e-6■■■■□ 22.9
MATR3P43243 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.713e-6■■■■□ 22.9
MATR3P43243 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.18□□□□□ -1.741e-6■■■■□ 22.9
MATR3P43243 AKAP13-216ENST00000560256 322 ntTSL 34.17□□□□□ -1.744e-6■■■■□ 22.9
MATR3P43243 BABAM2-211ENST00000604932 500 ntTSL 24.16□□□□□ -1.743e-6■■■■□ 22.9
MATR3P43243 EXOC5-203ENST00000554011 3661 ntTSL 1 (best)4.11□□□□□ -1.753e-6■■■■□ 22.9
MATR3P43243 ITFG1-212ENST00000569551 559 ntTSL 54.07□□□□□ -1.763e-6■■■■□ 22.9
MATR3P43243 SMCHD1-207ENST00000581711 546 ntTSL 43.95□□□□□ -1.786e-7■■■■□ 22.9
MATR3P43243 IPO11-211ENST00000511133 506 ntTSL 33.66□□□□□ -1.823e-6■■■■□ 22.9
MATR3P43243 GLMN-206ENST00000495852 891 ntTSL 53.6□□□□□ -1.831e-6■■■■□ 22.9
MATR3P43243 SMCHD1-203ENST00000577880 4951 ntTSL 23.51□□□□□ -1.853e-7■■■■□ 22.9
MATR3P43243 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.5□□□□□ -1.851e-6■■■■□ 22.9
MATR3P43243 CCDC91-211ENST00000540794 518 ntTSL 33.32□□□□□ -1.882e-6■■■■□ 22.9
MATR3P43243 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.3□□□□□ -1.883e-6■■■■□ 22.9
MATR3P43243 BABAM2-210ENST00000603461 494 ntTSL 33.18□□□□□ -1.93e-6■■■■□ 22.9
MATR3P43243 CDK8-202ENST00000465820 586 ntTSL 32.95□□□□□ -1.943e-6■■■■□ 22.9
MATR3P43243 CHD9-209ENST00000564255 2896 ntTSL 52.55□□□□□ -23e-6■■■■□ 22.9
MATR3P43243 CCDC91-204ENST00000536154 549 ntTSL 42.24□□□□□ -2.052e-6■■■■□ 22.9
MATR3P43243 SMCHD1-211ENST00000584897 4143 ntTSL 22.11□□□□□ -2.073e-7■■■■□ 22.9
MATR3P43243 BBX-214ENST00000449271 552 ntTSL 41.16□□□□□ -2.223e-6■■■■□ 22.9
MATR3P43243 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.562e-6■■■■□ 22.8
MATR3P43243 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.222e-6■■■■□ 22.8
MATR3P43243 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.012e-6■■■■□ 22.8
MATR3P43243 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26■■□□□ 1.753e-8■■■■□ 22.8
MATR3P43243 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC24.59■■□□□ 1.533e-8■■■■□ 22.8
MATR3P43243 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.39■■□□□ 1.493e-8■■■■□ 22.8
MATR3P43243 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC22.18■■□□□ 1.141e-6■■■■□ 22.8
MATR3P43243 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.991e-6■■■■□ 22.8
MATR3P43243 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.561e-6■■■■□ 22.8
MATR3P43243 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.06■□□□□ 0.321e-6■■■■□ 22.8
MATR3P43243 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.97■□□□□ 0.311e-6■■■■□ 22.8
MATR3P43243 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.83■□□□□ 0.281e-6■■■■□ 22.8
MATR3P43243 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.261e-6■■■■□ 22.8
MATR3P43243 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.33■□□□□ 0.213e-8■■■■□ 22.8
MATR3P43243 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC15.29■□□□□ 0.041e-6■■■■□ 22.8
MATR3P43243 MICA-210ENST00000616296 2260 ntTSL 5 BASIC14.71□□□□□ -0.065e-9■■■■□ 22.8
Retrieved 100 of 16,209 protein–RNA pairs in 119.6 ms