RNA–Protein interactions for RNA: ENST00000457496.5

BBX-219, Transcript of BBX, HMG-box containing, humanhuman

TSL 4

Gene BBX, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBX-219ENST00000457496 CHIC1Q5VXU3 224 aa26.27■■□□□ 1.8
BBX-219ENST00000457496 AEBP2Q6ZN18 517 aaPredicted RBP26.05■■□□□ 1.76
BBX-219ENST00000457496 PHF23Q9BUL5 403 aaPredicted RBP23.19■■□□□ 1.3
BBX-219ENST00000457496 SENP3Q9H4L4 574 aaPredicted RBP21.96■■□□□ 1.11
BBX-219ENST00000457496 PLPPR3Q6T4P5 718 aa21.7■■□□□ 1.06
BBX-219ENST00000457496 ADRA2BP18089 450 aa20.29■□□□□ 0.84
BBX-219ENST00000457496 FOXD1Q16676 465 aa20.29■□□□□ 0.84
BBX-219ENST00000457496 PPP6R1Q9UPN7 881 aa20.18■□□□□ 0.82
BBX-219ENST00000457496 KCNA4P22459 653 aa19.74■□□□□ 0.75
BBX-219ENST00000457496 EHMT2Q96KQ7 1210 aa19.34■□□□□ 0.69
BBX-219ENST00000457496 PIAS4Q8N2W9 510 aaPredicted RBP19.32■□□□□ 0.68
BBX-219ENST00000457496 PPP4R3CPQ6ZMV5 832 aa19.22■□□□□ 0.67
BBX-219ENST00000457496 NCBP3Q53F19 620 aaKnown RBP18.96■□□□□ 0.63
BBX-219ENST00000457496 SLC4A1APQ9BWU0 796 aaKnown RBP18.94■□□□□ 0.62
BBX-219ENST00000457496 CSRNP3Q8WYN3 585 aa18.77■□□□□ 0.6
BBX-219ENST00000457496 NPM3O75607 178 aaKnown RBP18.69■□□□□ 0.58
BBX-219ENST00000457496 CNKSR2Q8WXI2 1034 aa18.51■□□□□ 0.55
BBX-219ENST00000457496 SCAF1Q9H7N4 1312 aaKnown RBP18.49■□□□□ 0.55
BBX-219ENST00000457496 MSH5O43196 834 aa18.37■□□□□ 0.53
BBX-219ENST00000457496 ZBTB22O15209 634 aa18.19■□□□□ 0.5
BBX-219ENST00000457496 DNAJC5BQ9UF47 199 aa18.09■□□□□ 0.49
BBX-219ENST00000457496 MAPK8IP2Q13387 824 aaPredicted RBP18.07■□□□□ 0.48
BBX-219ENST00000457496 RNF216Q9NWF9 866 aaPredicted RBP17.94■□□□□ 0.46
BBX-219ENST00000457496 FOXD4L1Q9NU39 408 aa17.92■□□□□ 0.46
BBX-219ENST00000457496 DMRT2Q9Y5R5 561 aa17.68■□□□□ 0.42
BBX-219ENST00000457496 HOXD11P31277 338 aaPredicted RBP17.66■□□□□ 0.42
BBX-219ENST00000457496 SLC4A2P04920 1241 aa17.45■□□□□ 0.38
BBX-219ENST00000457496 MYCNP04198 464 aaPredicted RBP17.26■□□□□ 0.35
BBX-219ENST00000457496 ATXN8OSP0DMR3 200 aa17.24■□□□□ 0.35
BBX-219ENST00000457496 AMER1Q5JTC6 1135 aaPredicted RBP16.9■□□□□ 0.3
BBX-219ENST00000457496 FKBP8Q14318 412 aa16.89■□□□□ 0.29
BBX-219ENST00000457496 RTN4Q9NQC3 1192 aaKnown RBP16.88■□□□□ 0.29
BBX-219ENST00000457496 DCAF8L1A6NGE4 600 aa16.81■□□□□ 0.28
BBX-219ENST00000457496 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.78■□□□□ 0.286e-7■■■■□ 25.7
BBX-219ENST00000457496 ATF5Q9Y2D1 282 aaPredicted RBP16.73■□□□□ 0.27
BBX-219ENST00000457496 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.7■□□□□ 0.26
BBX-219ENST00000457496 HNRNPUL2Q1KMD3 747 aaKnown RBP16.7■□□□□ 0.26
BBX-219ENST00000457496 SAMD1Q6SPF0 538 aaPredicted RBP16.69■□□□□ 0.26
BBX-219ENST00000457496 U3KPZ7 1027 aaPredicted RBP16.64■□□□□ 0.25
BBX-219ENST00000457496 SLC24A1O60721 1099 aa16.62■□□□□ 0.25
BBX-219ENST00000457496 ZNF219Q9P2Y4 722 aaPredicted RBP16.35■□□□□ 0.21
BBX-219ENST00000457496 APLP2Q06481 763 aa16.33■□□□□ 0.2
BBX-219ENST00000457496 SPDYE4A6NLX3 237 aa16.08■□□□□ 0.16
BBX-219ENST00000457496 FBXO3Q9UK99 471 aa16.07■□□□□ 0.16
BBX-219ENST00000457496 MKRN4PQ13434 485 aaPredicted RBP16.06■□□□□ 0.16
BBX-219ENST00000457496 PROM2Q8N271 834 aa15.99■□□□□ 0.15
BBX-219ENST00000457496 FBLN2P98095 1184 aa15.95■□□□□ 0.14
BBX-219ENST00000457496 TRHP20396 242 aaPredicted RBP15.91■□□□□ 0.14
BBX-219ENST00000457496 SPINK5Q9NQ38 1064 aaPredicted RBP15.91■□□□□ 0.14
BBX-219ENST00000457496 POLA2Q14181 598 aa15.86■□□□□ 0.13
BBX-219ENST00000457496 VASPP50552 380 aaPredicted RBP15.84■□□□□ 0.13
BBX-219ENST00000457496 RNF39Q9H2S5 420 aa15.83■□□□□ 0.12
BBX-219ENST00000457496 CAPN15O75808 1086 aa15.78■□□□□ 0.12
BBX-219ENST00000457496 C1QBPQ07021 282 aaKnown RBP15.69■□□□□ 0.1
BBX-219ENST00000457496 IFNLR1Q8IU57 520 aaPredicted RBP15.69■□□□□ 0.1
BBX-219ENST00000457496 ZBTB12Q9Y330 459 aaPredicted RBP15.68■□□□□ 0.1
BBX-219ENST00000457496 POTEDQ86YR6 584 aa15.67■□□□□ 0.1
BBX-219ENST00000457496 PLCB2Q00722 1185 aa15.57■□□□□ 0.08
BBX-219ENST00000457496 ABCB7O75027 752 aa15.56■□□□□ 0.08
BBX-219ENST00000457496 PKD2Q13563 968 aa15.49■□□□□ 0.07
BBX-219ENST00000457496 DCAF8L2P0C7V8 631 aa15.44■□□□□ 0.06
BBX-219ENST00000457496 ZNF692Q9BU19 519 aaPredicted RBP15.38■□□□□ 0.05
BBX-219ENST00000457496 DSG3P32926 999 aa15.36■□□□□ 0.05
BBX-219ENST00000457496 SPOCK2Q92563 424 aa15.35■□□□□ 0.05
BBX-219ENST00000457496 STAG3Q9UJ98 1225 aa15.35■□□□□ 0.05
BBX-219ENST00000457496 SPDYE2BA6NHP3 402 aa15.33■□□□□ 0.04
BBX-219ENST00000457496 SPDYE6P0CI01 402 aa15.33■□□□□ 0.04
BBX-219ENST00000457496 HAP1P54257 671 aaPredicted RBP15.33■□□□□ 0.04
BBX-219ENST00000457496 SPDYE2Q495Y8 402 aa15.33■□□□□ 0.04
BBX-219ENST00000457496 KLHL34Q8N239 644 aa15.33■□□□□ 0.04
BBX-219ENST00000457496 SSUH2Q9Y2M2 353 aa15.32■□□□□ 0.04
BBX-219ENST00000457496 OSCARQ8IYS5 282 aa15.29■□□□□ 0.04
BBX-219ENST00000457496 ECM2O94769 699 aaPredicted RBP15.22■□□□□ 0.03
BBX-219ENST00000457496 PABPN1Q86U42 306 aaKnown RBP eCLIP15.21■□□□□ 0.03
BBX-219ENST00000457496 PLCD3Q8N3E9 789 aa15.21■□□□□ 0.03
BBX-219ENST00000457496 VSIG10Q8N0Z9 540 aa15.15■□□□□ 0.02
BBX-219ENST00000457496 BBXQ8WY36 941 aaPredicted RBP15.15■□□□□ 0.02
BBX-219ENST00000457496 MIER1Q8N108 512 aa15.14■□□□□ 0.01
BBX-219ENST00000457496 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.13■□□□□ 0.01
BBX-219ENST00000457496 NPM1P06748 294 aaKnown RBP eCLIP15.09■□□□□ 0.01
BBX-219ENST00000457496 BCANQ96GW7 911 aa15.06■□□□□ 0
BBX-219ENST00000457496 RGL2O15211 777 aa15.05■□□□□ -0
BBX-219ENST00000457496 PAXIP1Q6ZW49 1069 aaPredicted RBP15.01□□□□□ -0.01
BBX-219ENST00000457496 ZBTB47Q9UFB7 747 aaPredicted RBP15.01□□□□□ -0.01
BBX-219ENST00000457496 PLEKHG5O94827 1062 aa15□□□□□ -0.01
BBX-219ENST00000457496 CFAP44Q96MT7 982 aa14.95□□□□□ -0.02
BBX-219ENST00000457496 CIZ1Q9ULV3 898 aaPredicted RBP14.94□□□□□ -0.02
BBX-219ENST00000457496 KDM2AQ9Y2K7 1162 aa14.93□□□□□ -0.02
BBX-219ENST00000457496 SPRYD3Q8NCJ5 442 aa14.89□□□□□ -0.03
BBX-219ENST00000457496 TRIM41Q8WV44 630 aa14.89□□□□□ -0.03
BBX-219ENST00000457496 CHGAP10645 457 aaKnown RBP14.84□□□□□ -0.03
BBX-219ENST00000457496 TAOK2Q9UL54 1235 aa14.81□□□□□ -0.04
BBX-219ENST00000457496 TSHZ2Q9NRE2 1034 aa14.78□□□□□ -0.04
BBX-219ENST00000457496 CACNB1Q02641 598 aaPredicted RBP14.77□□□□□ -0.05
BBX-219ENST00000457496 PRKCSHP14314 528 aaPredicted RBP14.75□□□□□ -0.05
BBX-219ENST00000457496 GSE1Q14687 1217 aa14.75□□□□□ -0.05
BBX-219ENST00000457496 HS6ST3Q8IZP7 471 aa14.75□□□□□ -0.05
BBX-219ENST00000457496 NUBP1P53384 320 aa14.7□□□□□ -0.06
BBX-219ENST00000457496 RNF25Q96BH1 459 aaPredicted RBP14.69□□□□□ -0.06
BBX-219ENST00000457496 DNAJC5Q9H3Z4 198 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 220.9 ms