RNA–Protein interactions for RNA: ENST00000425868.5

BBX-208, Transcript of BBX, HMG-box containing, humanhuman

TSL 4

Gene BBX, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBX-208ENST00000425868 AEBP2Q6ZN18 517 aaPredicted RBP23.15■■□□□ 1.3
BBX-208ENST00000425868 CHIC1Q5VXU3 224 aa23.14■■□□□ 1.29
BBX-208ENST00000425868 PHF23Q9BUL5 403 aaPredicted RBP20.42■□□□□ 0.86
BBX-208ENST00000425868 SENP3Q9H4L4 574 aaPredicted RBP19.56■□□□□ 0.72
BBX-208ENST00000425868 PLPPR3Q6T4P5 718 aa19.04■□□□□ 0.64
BBX-208ENST00000425868 FOXD1Q16676 465 aa18.08■□□□□ 0.48
BBX-208ENST00000425868 ADRA2BP18089 450 aa17.87■□□□□ 0.45
BBX-208ENST00000425868 PPP6R1Q9UPN7 881 aa17.85■□□□□ 0.45
BBX-208ENST00000425868 PIAS4Q8N2W9 510 aaPredicted RBP17.2■□□□□ 0.34
BBX-208ENST00000425868 KCNA4P22459 653 aa17.08■□□□□ 0.32
BBX-208ENST00000425868 PPP4R3CPQ6ZMV5 832 aa16.85■□□□□ 0.29
BBX-208ENST00000425868 NCBP3Q53F19 620 aaKnown RBP16.57■□□□□ 0.24
BBX-208ENST00000425868 EHMT2Q96KQ7 1210 aa16.53■□□□□ 0.24
BBX-208ENST00000425868 MSH5O43196 834 aa16.46■□□□□ 0.23
BBX-208ENST00000425868 SLC4A1APQ9BWU0 796 aaKnown RBP16.37■□□□□ 0.21
BBX-208ENST00000425868 SCAF1Q9H7N4 1312 aaKnown RBP16.35■□□□□ 0.21
BBX-208ENST00000425868 NPM3O75607 178 aaKnown RBP16.31■□□□□ 0.2
BBX-208ENST00000425868 CNKSR2Q8WXI2 1034 aa16.26■□□□□ 0.19
BBX-208ENST00000425868 CSRNP3Q8WYN3 585 aa16.08■□□□□ 0.16
BBX-208ENST00000425868 MAPK8IP2Q13387 824 aaPredicted RBP16.06■□□□□ 0.16
BBX-208ENST00000425868 RNF216Q9NWF9 866 aaPredicted RBP15.8■□□□□ 0.12
BBX-208ENST00000425868 DNAJC5BQ9UF47 199 aa15.73■□□□□ 0.11
BBX-208ENST00000425868 ZBTB22O15209 634 aa15.71■□□□□ 0.11
BBX-208ENST00000425868 DMRT2Q9Y5R5 561 aa15.7■□□□□ 0.1
BBX-208ENST00000425868 HOXD11P31277 338 aaPredicted RBP15.58■□□□□ 0.08
BBX-208ENST00000425868 FOXD4L1Q9NU39 408 aa15.55■□□□□ 0.08
BBX-208ENST00000425868 POTEDQ86YR6 584 aa15.37■□□□□ 0.05
BBX-208ENST00000425868 SLC4A2P04920 1241 aa15.27■□□□□ 0.04
BBX-208ENST00000425868 MYCNP04198 464 aaPredicted RBP15.06■□□□□ 0
BBX-208ENST00000425868 DCAF8L1A6NGE4 600 aa15.02■□□□□ -0
BBX-208ENST00000425868 ATXN8OSP0DMR3 200 aa14.97□□□□□ -0.01
BBX-208ENST00000425868 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.89□□□□□ -0.033e-6■■□□□ 11.7
BBX-208ENST00000425868 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.69□□□□□ -0.06
BBX-208ENST00000425868 HNRNPUL2Q1KMD3 747 aaKnown RBP14.69□□□□□ -0.06
BBX-208ENST00000425868 U3KPZ7 1027 aaPredicted RBP14.67□□□□□ -0.06
BBX-208ENST00000425868 SAMD1Q6SPF0 538 aaPredicted RBP14.66□□□□□ -0.06
BBX-208ENST00000425868 ATF5Q9Y2D1 282 aaPredicted RBP14.62□□□□□ -0.07
BBX-208ENST00000425868 FKBP8Q14318 412 aa14.51□□□□□ -0.09
BBX-208ENST00000425868 APLP2Q06481 763 aa14.4□□□□□ -0.1
BBX-208ENST00000425868 ZNF219Q9P2Y4 722 aaPredicted RBP14.35□□□□□ -0.11
BBX-208ENST00000425868 AMER1Q5JTC6 1135 aaPredicted RBP14.22□□□□□ -0.13
BBX-208ENST00000425868 RNF39Q9H2S5 420 aa14.16□□□□□ -0.14
BBX-208ENST00000425868 RTN4Q9NQC3 1192 aaKnown RBP14.16□□□□□ -0.14
BBX-208ENST00000425868 TRHP20396 242 aaPredicted RBP14.11□□□□□ -0.15
BBX-208ENST00000425868 SPINK5Q9NQ38 1064 aaPredicted RBP14.11□□□□□ -0.15
BBX-208ENST00000425868 CAPN15O75808 1086 aa14.04□□□□□ -0.16
BBX-208ENST00000425868 C1QBPQ07021 282 aaKnown RBP14.03□□□□□ -0.16
BBX-208ENST00000425868 POLA2Q14181 598 aa14.02□□□□□ -0.17
BBX-208ENST00000425868 MKRN4PQ13434 485 aaPredicted RBP14.01□□□□□ -0.17
BBX-208ENST00000425868 SPDYE4A6NLX3 237 aa13.98□□□□□ -0.17
BBX-208ENST00000425868 FBLN2P98095 1184 aa13.98□□□□□ -0.17
BBX-208ENST00000425868 SLC24A1O60721 1099 aa13.88□□□□□ -0.19
BBX-208ENST00000425868 FBXO3Q9UK99 471 aa13.85□□□□□ -0.19
BBX-208ENST00000425868 ABCB7O75027 752 aa13.82□□□□□ -0.2
BBX-208ENST00000425868 ZBTB12Q9Y330 459 aaPredicted RBP13.8□□□□□ -0.2
BBX-208ENST00000425868 PROM2Q8N271 834 aa13.79□□□□□ -0.2
BBX-208ENST00000425868 DSG3P32926 999 aa13.67□□□□□ -0.22
BBX-208ENST00000425868 VASPP50552 380 aaPredicted RBP13.64□□□□□ -0.23
BBX-208ENST00000425868 ZNF692Q9BU19 519 aaPredicted RBP13.53□□□□□ -0.24
BBX-208ENST00000425868 IFNLR1Q8IU57 520 aaPredicted RBP13.5□□□□□ -0.25
BBX-208ENST00000425868 OSCARQ8IYS5 282 aa13.49□□□□□ -0.25
BBX-208ENST00000425868 SPDYE2BA6NHP3 402 aa13.48□□□□□ -0.25
BBX-208ENST00000425868 SPDYE6P0CI01 402 aa13.48□□□□□ -0.25
BBX-208ENST00000425868 SPDYE2Q495Y8 402 aa13.48□□□□□ -0.25
BBX-208ENST00000425868 CACNB1Q02641 598 aaPredicted RBP13.42□□□□□ -0.26
BBX-208ENST00000425868 SSUH2Q9Y2M2 353 aa13.42□□□□□ -0.26
BBX-208ENST00000425868 STAG3Q9UJ98 1225 aa13.37□□□□□ -0.27
BBX-208ENST00000425868 PABPN1Q86U42 306 aaKnown RBP eCLIP13.36□□□□□ -0.27
BBX-208ENST00000425868 KLHL34Q8N239 644 aa13.31□□□□□ -0.28
BBX-208ENST00000425868 DCAF8L2P0C7V8 631 aa13.27□□□□□ -0.29
BBX-208ENST00000425868 PLCD3Q8N3E9 789 aa13.26□□□□□ -0.29
BBX-208ENST00000425868 PKD2Q13563 968 aa13.25□□□□□ -0.29
BBX-208ENST00000425868 SPOCK2Q92563 424 aa13.25□□□□□ -0.29
BBX-208ENST00000425868 MIER1Q8N108 512 aa13.23□□□□□ -0.29
BBX-208ENST00000425868 PLEKHG5O94827 1062 aa13.1□□□□□ -0.31
BBX-208ENST00000425868 PLCB2Q00722 1185 aa13.1□□□□□ -0.31
BBX-208ENST00000425868 ECM2O94769 699 aaPredicted RBP13.08□□□□□ -0.32
BBX-208ENST00000425868 ZBTB47Q9UFB7 747 aaPredicted RBP13.05□□□□□ -0.32
BBX-208ENST00000425868 RBM42Q9BTD8 480 aaKnown RBP13.01□□□□□ -0.33
BBX-208ENST00000425868 HAP1P54257 671 aaPredicted RBP13□□□□□ -0.33
BBX-208ENST00000425868 AKT1S1Q96B36 256 aa12.97□□□□□ -0.33
BBX-208ENST00000425868 CIZ1Q9ULV3 898 aaPredicted RBP12.97□□□□□ -0.33
BBX-208ENST00000425868 SPDYE1Q8NFV5 336 aaPredicted RBP12.96□□□□□ -0.33
BBX-208ENST00000425868 RGL2O15211 777 aa12.92□□□□□ -0.34
BBX-208ENST00000425868 BBXQ8WY36 941 aaPredicted RBP12.89□□□□□ -0.35
BBX-208ENST00000425868 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.88□□□□□ -0.35
BBX-208ENST00000425868 CLEC11AQ9Y240 323 aa12.88□□□□□ -0.35
BBX-208ENST00000425868 NPM1P06748 294 aaKnown RBP eCLIP12.87□□□□□ -0.35
BBX-208ENST00000425868 PRR29P0C7W0 189 aa12.85□□□□□ -0.35
BBX-208ENST00000425868 REM2Q8IYK8 340 aaPredicted RBP12.85□□□□□ -0.35
BBX-208ENST00000425868 TRIM41Q8WV44 630 aa12.84□□□□□ -0.35
BBX-208ENST00000425868 GSE1Q14687 1217 aa12.81□□□□□ -0.36
BBX-208ENST00000425868 NUBP1P53384 320 aa12.79□□□□□ -0.36
BBX-208ENST00000425868 CREBZFQ9NS37 354 aa12.78□□□□□ -0.36
BBX-208ENST00000425868 PAXIP1Q6ZW49 1069 aaPredicted RBP12.77□□□□□ -0.37
BBX-208ENST00000425868 DCAF8Q5TAQ9 597 aa12.76□□□□□ -0.37
BBX-208ENST00000425868 CHGAP10645 457 aaKnown RBP12.75□□□□□ -0.37
BBX-208ENST00000425868 CFAP44Q96MT7 982 aa12.74□□□□□ -0.37
BBX-208ENST00000425868 VSIG10Q8N0Z9 540 aa12.73□□□□□ -0.37
BBX-208ENST00000425868 MNX1P50219 401 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 806 ms