RNA–Protein interactions for RNA: ENST00000303521.10

SCAPER-201, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 5,438 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-201ENST00000303521 NISCHQ9Y2I1 1504 aa11.9□□□□□ -0.51
SCAPER-201ENST00000303521 DCAF8L2P0C7V8 631 aa11.61□□□□□ -0.55
SCAPER-201ENST00000303521 ABCC9O60706 1549 aa10.78□□□□□ -0.68
SCAPER-201ENST00000303521 FAM9AQ8IZU1 332 aaPredicted RBP10.73□□□□□ -0.69
SCAPER-201ENST00000303521 CCDC180Q9P1Z9 1646 aa10.42□□□□□ -0.74
SCAPER-201ENST00000303521 RB1CC1Q8TDY2 1594 aa10.35□□□□□ -0.75
SCAPER-201ENST00000303521 PABPN1Q86U42 306 aaKnown RBP eCLIP10.32□□□□□ -0.76
SCAPER-201ENST00000303521 PELP1Q8IZL8 1130 aaKnown RBP10.19□□□□□ -0.78
SCAPER-201ENST00000303521 NACADO15069 1562 aa10.18□□□□□ -0.78
SCAPER-201ENST00000303521 SHROOM4Q9ULL8 1493 aa10.18□□□□□ -0.78
SCAPER-201ENST00000303521 MYT1Q01538 1121 aa10.08□□□□□ -0.8
SCAPER-201ENST00000303521 SUPT5HO00267 1087 aaKnown RBP10.05□□□□□ -0.8
SCAPER-201ENST00000303521 MYO15BQ96JP2 1530 aa9.98□□□□□ -0.81
SCAPER-201ENST00000303521 ERCC6Q03468 1493 aa9.94□□□□□ -0.82
SCAPER-201ENST00000303521 SCRIBQ14160 1630 aa9.93□□□□□ -0.82
SCAPER-201ENST00000303521 ZCCHC6Q5VYS8 1495 aaKnown RBP9.9□□□□□ -0.83
SCAPER-201ENST00000303521 APLP2Q06481 763 aa9.89□□□□□ -0.83
SCAPER-201ENST00000303521 NPM1P06748 294 aaKnown RBP eCLIP9.87□□□□□ -0.83
SCAPER-201ENST00000303521 ZEB1P37275 1124 aaPredicted RBP9.87□□□□□ -0.83
SCAPER-201ENST00000303521 FBLN2P98095 1184 aa9.82□□□□□ -0.84
SCAPER-201ENST00000303521 PCGF6Q9BYE7 350 aa9.79□□□□□ -0.84
SCAPER-201ENST00000303521 HRCP23327 699 aa9.78□□□□□ -0.84
SCAPER-201ENST00000303521 MYT1LQ9UL68 1186 aa9.77□□□□□ -0.85
SCAPER-201ENST00000303521 CECR2Q9BXF3 1484 aa9.75□□□□□ -0.85
SCAPER-201ENST00000303521 CENPBP07199 599 aaPredicted RBP9.75□□□□□ -0.85
SCAPER-201ENST00000303521 DCAF1Q9Y4B6 1507 aa9.72□□□□□ -0.85
SCAPER-201ENST00000303521 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.71□□□□□ -0.86
SCAPER-201ENST00000303521 HNRNPUL2Q1KMD3 747 aaKnown RBP9.71□□□□□ -0.86
SCAPER-201ENST00000303521 PDS5BQ9NTI5 1447 aa9.68□□□□□ -0.86
SCAPER-201ENST00000303521 ATP1B4Q9UN42 357 aaPredicted RBP9.67□□□□□ -0.86
SCAPER-201ENST00000303521 BAZ1BQ9UIG0 1483 aaKnown RBP9.65□□□□□ -0.86
SCAPER-201ENST00000303521 CHMP7Q8WUX9 453 aaPredicted RBP9.62□□□□□ -0.87
SCAPER-201ENST00000303521 TRIM41Q8WV44 630 aa9.62□□□□□ -0.87
SCAPER-201ENST00000303521 TRHP20396 242 aaPredicted RBP9.62□□□□□ -0.87
SCAPER-201ENST00000303521 AEBP2Q6ZN18 517 aaPredicted RBP9.62□□□□□ -0.87
SCAPER-201ENST00000303521 SMARCA2P51531 1590 aa9.6□□□□□ -0.87
SCAPER-201ENST00000303521 TTBK1Q5TCY1 1321 aaPredicted RBP9.59□□□□□ -0.87
SCAPER-201ENST00000303521 ESF1Q9H501 851 aaKnown RBP9.59□□□□□ -0.87
SCAPER-201ENST00000303521 UBTFP17480 764 aaKnown RBP9.54□□□□□ -0.88
SCAPER-201ENST00000303521 TRIM26Q12899 539 aaPredicted RBP9.54□□□□□ -0.88
SCAPER-201ENST00000303521 BAZ1AQ9NRL2 1556 aaPredicted RBP9.51□□□□□ -0.89
SCAPER-201ENST00000303521 OSCARQ8IYS5 282 aa9.49□□□□□ -0.89
SCAPER-201ENST00000303521 CDK11AQ9UQ88 783 aaPredicted RBP9.49□□□□□ -0.89
SCAPER-201ENST00000303521 CHIC1Q5VXU3 224 aa9.48□□□□□ -0.89
SCAPER-201ENST00000303521 RANGAP1P46060 587 aaPredicted RBP9.45□□□□□ -0.9
SCAPER-201ENST00000303521 CCER1Q8TC90 406 aaPredicted RBP9.44□□□□□ -0.9
SCAPER-201ENST00000303521 ERICH6Q7L0X2 663 aa9.39□□□□□ -0.91
SCAPER-201ENST00000303521 EIF4G1Q04637 1599 aaKnown RBP9.39□□□□□ -0.91
SCAPER-201ENST00000303521 ABCC8Q09428 1581 aa9.39□□□□□ -0.91
SCAPER-201ENST00000303521 EHMT2Q96KQ7 1210 aa9.37□□□□□ -0.91
SCAPER-201ENST00000303521 CEP164Q9UPV0 1460 aa9.36□□□□□ -0.91
SCAPER-201ENST00000303521 PPARGC1BQ86YN6 1023 aaKnown RBP9.36□□□□□ -0.91
SCAPER-201ENST00000303521 CADPSQ9ULU8 1353 aa9.35□□□□□ -0.91
SCAPER-201ENST00000303521 CC2D2AQ9P2K1 1620 aa9.31□□□□□ -0.92
SCAPER-201ENST00000303521 NCAPD3P42695 1498 aa9.29□□□□□ -0.92
SCAPER-201ENST00000303521 ATAD2BQ9ULI0 1458 aa9.27□□□□□ -0.93
SCAPER-201ENST00000303521 ARID4BQ4LE39 1312 aaPredicted RBP9.27□□□□□ -0.93
SCAPER-201ENST00000303521 NEFLP07196 543 aa9.26□□□□□ -0.93
SCAPER-201ENST00000303521 YTHDC1Q96MU7 727 aaKnown RBP9.26□□□□□ -0.93
SCAPER-201ENST00000303521 CUX2O14529 1486 aa9.25□□□□□ -0.93
SCAPER-201ENST00000303521 CARMIL2Q6F5E8 1435 aa9.25□□□□□ -0.93
SCAPER-201ENST00000303521 DNAJC5BQ9UF47 199 aa9.24□□□□□ -0.93
SCAPER-201ENST00000303521 LOC105371045A0A1W2PR82 267 aa9.22□□□□□ -0.93
SCAPER-201ENST00000303521 BCANQ96GW7 911 aa9.22□□□□□ -0.93
SCAPER-201ENST00000303521 WRNQ14191 1432 aaPredicted RBP eCLIP9.21□□□□□ -0.93
SCAPER-201ENST00000303521 RSF1Q96T23 1441 aaPredicted RBP9.21□□□□□ -0.93
SCAPER-201ENST00000303521 MRC2Q9UBG0 1479 aa9.21□□□□□ -0.93
SCAPER-201ENST00000303521 CYB5RLQ6IPT4 315 aa9.2□□□□□ -0.94
SCAPER-201ENST00000303521 STAG3Q9UJ98 1225 aa9.2□□□□□ -0.94
SCAPER-201ENST00000303521 DIEXFQ68CQ4 756 aaKnown RBP9.19□□□□□ -0.94
SCAPER-201ENST00000303521 PLEKHD1A6NEE1 506 aa9.18□□□□□ -0.94
SCAPER-201ENST00000303521 ACIN1Q9UKV3 1341 aaKnown RBP9.18□□□□□ -0.94
SCAPER-201ENST00000303521 FANCD2Q9BXW9 1451 aa9.18□□□□□ -0.94
SCAPER-201ENST00000303521 SOGA1O94964 1423 aa9.17□□□□□ -0.94
SCAPER-201ENST00000303521 KIF27Q86VH2 1401 aa9.16□□□□□ -0.94
SCAPER-201ENST00000303521 HMGXB3Q12766 1538 aa9.16□□□□□ -0.94
SCAPER-201ENST00000303521 GTF3C3Q9Y5Q9 886 aa9.16□□□□□ -0.94
SCAPER-201ENST00000303521 UNC13AQ9UPW8 1703 aa9.16□□□□□ -0.94
SCAPER-201ENST00000303521 SMARCA4P51532 1647 aa9.14□□□□□ -0.95
SCAPER-201ENST00000303521 PLPPR3Q6T4P5 718 aa9.13□□□□□ -0.95
SCAPER-201ENST00000303521 WIZO95785 1651 aa9.13□□□□□ -0.95
SCAPER-201ENST00000303521 IFT140Q96RY7 1462 aa9.12□□□□□ -0.95
SCAPER-201ENST00000303521 LAMC3Q9Y6N6 1575 aa9.12□□□□□ -0.95
SCAPER-201ENST00000303521 MROH2BQ7Z745 1585 aa9.11□□□□□ -0.95
SCAPER-201ENST00000303521 CLSPNQ9HAW4 1339 aa9.1□□□□□ -0.95
SCAPER-201ENST00000303521 KCNH8Q96L42 1107 aa9.1□□□□□ -0.95
SCAPER-201ENST00000303521 FOXD1Q16676 465 aa9.09□□□□□ -0.95
SCAPER-201ENST00000303521 CSRNP3Q8WYN3 585 aa9.09□□□□□ -0.95
SCAPER-201ENST00000303521 TOP2AP11388 1531 aaKnown RBP9.07□□□□□ -0.96
SCAPER-201ENST00000303521 HDGFP51858 240 aaKnown RBP9.07□□□□□ -0.96
SCAPER-201ENST00000303521 ZNF777Q9ULD5 760 aaPredicted RBP9.06□□□□□ -0.96
SCAPER-201ENST00000303521 TSPY4P0CV99 314 aa9.05□□□□□ -0.96
SCAPER-201ENST00000303521 TSPY10P0CW01 314 aa9.05□□□□□ -0.96
SCAPER-201ENST00000303521 DNAJC5Q9H3Z4 198 aa9.05□□□□□ -0.96
SCAPER-201ENST00000303521 SCAF1Q9H7N4 1312 aaKnown RBP9.04□□□□□ -0.96
SCAPER-201ENST00000303521 EEA1Q15075 1411 aa9.03□□□□□ -0.96
SCAPER-201ENST00000303521 P3H3Q8IVL6 736 aa9.02□□□□□ -0.97
SCAPER-201ENST00000303521 BICRAQ9NZM4 1560 aa9.01□□□□□ -0.97
SCAPER-201ENST00000303521 TDRD9Q8NDG6 1382 aaKnown RBP9.01□□□□□ -0.97
SCAPER-201ENST00000303521 ARID3CA6NKF2 412 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms