Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFC1P35251 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.67■■□□□ 1.06
RFC1P35251 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFC1P35251 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.67■■□□□ 1.06
RFC1P35251 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.67■■□□□ 1.06
RFC1P35251 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
RFC1P35251 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFC1P35251 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFC1P35251 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.67■■□□□ 1.06
RFC1P35251 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFC1P35251 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.66■■□□□ 1.06
RFC1P35251 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFC1P35251 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RFC1P35251 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFC1P35251 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.66■■□□□ 1.06
RFC1P35251 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFC1P35251 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
RFC1P35251 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFC1P35251 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.66■■□□□ 1.06
RFC1P35251 AC091799.1-201ENST00000422823 811 ntBASIC21.66■■□□□ 1.06
RFC1P35251 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.66■■□□□ 1.06
RFC1P35251 AC137761.2-201ENST00000561729 223 ntBASIC21.66■■□□□ 1.06
RFC1P35251 AC145350.3-201ENST00000569033 163 ntBASIC21.66■■□□□ 1.06
RFC1P35251 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.66■■□□□ 1.06
RFC1P35251 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RFC1P35251 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RFC1P35251 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RFC1P35251 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.66■■□□□ 1.06
RFC1P35251 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFC1P35251 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFC1P35251 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.66■■□□□ 1.06
RFC1P35251 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFC1P35251 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.66■■□□□ 1.06
RFC1P35251 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.65■■□□□ 1.06
RFC1P35251 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFC1P35251 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFC1P35251 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFC1P35251 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFC1P35251 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.65■■□□□ 1.06
RFC1P35251 MIR935-201ENST00000401179 91 ntBASIC21.65■■□□□ 1.06
RFC1P35251 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.65■■□□□ 1.06
RFC1P35251 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.65■■□□□ 1.06
RFC1P35251 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.65■■□□□ 1.06
RFC1P35251 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
RFC1P35251 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFC1P35251 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFC1P35251 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFC1P35251 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
RFC1P35251 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
RFC1P35251 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.65■■□□□ 1.06
RFC1P35251 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RFC1P35251 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RFC1P35251 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RFC1P35251 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.06
RFC1P35251 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RFC1P35251 AC116050.2-201ENST00000612102 1779 ntBASIC21.64■■□□□ 1.06
RFC1P35251 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.64■■□□□ 1.06
RFC1P35251 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.64■■□□□ 1.05
RFC1P35251 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
RFC1P35251 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RFC1P35251 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.64■■□□□ 1.05
RFC1P35251 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.64■■□□□ 1.05
RFC1P35251 FEM1AP1-201ENST00000431297 1995 ntBASIC21.64■■□□□ 1.05
RFC1P35251 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RFC1P35251 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RFC1P35251 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RFC1P35251 AC007225.1-201ENST00000566331 1836 ntBASIC21.64■■□□□ 1.05
RFC1P35251 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFC1P35251 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.63■■□□□ 1.05
RFC1P35251 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
RFC1P35251 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.63■■□□□ 1.05
RFC1P35251 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.63■■□□□ 1.05
RFC1P35251 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
RFC1P35251 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RFC1P35251 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFC1P35251 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFC1P35251 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.62■■□□□ 1.05
RFC1P35251 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.62■■□□□ 1.05
RFC1P35251 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
RFC1P35251 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFC1P35251 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFC1P35251 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFC1P35251 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFC1P35251 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
RFC1P35251 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RFC1P35251 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFC1P35251 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.62■■□□□ 1.05
RFC1P35251 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFC1P35251 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFC1P35251 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.62■■□□□ 1.05
RFC1P35251 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
RFC1P35251 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
RFC1P35251 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RFC1P35251 AC010536.3-201ENST00000620306 533 ntBASIC21.62■■□□□ 1.05
RFC1P35251 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.62■■□□□ 1.05
RFC1P35251 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.62■■□□□ 1.05
RFC1P35251 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFC1P35251 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFC1P35251 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.62■■□□□ 1.05
RFC1P35251 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms