Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC25.51■■□□□ 1.67
KCNA3P22001 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.51■■□□□ 1.67
KCNA3P22001 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC25.51■■□□□ 1.67
KCNA3P22001 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
KCNA3P22001 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC25.51■■□□□ 1.67
KCNA3P22001 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC25.51■■□□□ 1.67
KCNA3P22001 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC25.51■■□□□ 1.67
KCNA3P22001 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
KCNA3P22001 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
KCNA3P22001 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
KCNA3P22001 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
KCNA3P22001 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC25.5■■□□□ 1.67
KCNA3P22001 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC25.5■■□□□ 1.67
KCNA3P22001 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC25.5■■□□□ 1.67
KCNA3P22001 AF186192.3-201ENST00000583427 947 ntBASIC25.5■■□□□ 1.67
KCNA3P22001 WDR88-203ENST00000592765 651 ntTSL 5 BASIC25.5■■□□□ 1.67
KCNA3P22001 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC25.5■■□□□ 1.67
KCNA3P22001 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
KCNA3P22001 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
KCNA3P22001 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
KCNA3P22001 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC25.49■■□□□ 1.67
KCNA3P22001 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
KCNA3P22001 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
KCNA3P22001 AC092053.2-201ENST00000640557 1818 ntBASIC25.49■■□□□ 1.67
KCNA3P22001 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC25.49■■□□□ 1.67
KCNA3P22001 AL355355.2-201ENST00000442321 338 ntBASIC25.49■■□□□ 1.67
KCNA3P22001 NME3-204ENST00000563498 920 ntTSL 2 BASIC25.49■■□□□ 1.67
KCNA3P22001 AC005363.2-201ENST00000618631 242 ntBASIC25.49■■□□□ 1.67
KCNA3P22001 AC068473.5-201ENST00000616428 2072 ntBASIC25.49■■□□□ 1.67
KCNA3P22001 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
KCNA3P22001 NARF-205ENST00000412079 1760 ntTSL 5 BASIC25.49■■□□□ 1.67
KCNA3P22001 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC25.48■■□□□ 1.67
KCNA3P22001 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
KCNA3P22001 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC25.48■■□□□ 1.67
KCNA3P22001 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
KCNA3P22001 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC25.48■■□□□ 1.67
KCNA3P22001 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
KCNA3P22001 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
KCNA3P22001 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
KCNA3P22001 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
KCNA3P22001 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
KCNA3P22001 RNF146-204ENST00000476956 884 ntTSL 2 BASIC25.48■■□□□ 1.67
KCNA3P22001 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC25.48■■□□□ 1.67
KCNA3P22001 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
KCNA3P22001 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
KCNA3P22001 MOK-233ENST00000524214 1539 ntTSL 2 BASIC25.47■■□□□ 1.67
KCNA3P22001 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
KCNA3P22001 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC25.47■■□□□ 1.67
KCNA3P22001 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
KCNA3P22001 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC25.47■■□□□ 1.67
KCNA3P22001 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
KCNA3P22001 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC25.47■■□□□ 1.67
KCNA3P22001 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC25.47■■□□□ 1.67
KCNA3P22001 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC25.47■■□□□ 1.67
KCNA3P22001 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC25.47■■□□□ 1.67
KCNA3P22001 RMI2-205ENST00000576027 818 ntTSL 2 BASIC25.47■■□□□ 1.67
KCNA3P22001 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC25.47■■□□□ 1.67
KCNA3P22001 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
KCNA3P22001 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC25.47■■□□□ 1.67
KCNA3P22001 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC25.47■■□□□ 1.67
KCNA3P22001 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
KCNA3P22001 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
KCNA3P22001 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
KCNA3P22001 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
KCNA3P22001 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
KCNA3P22001 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
KCNA3P22001 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
KCNA3P22001 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
KCNA3P22001 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
KCNA3P22001 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC25.46■■□□□ 1.67
KCNA3P22001 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC25.46■■□□□ 1.67
KCNA3P22001 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC25.46■■□□□ 1.67
KCNA3P22001 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
KCNA3P22001 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
KCNA3P22001 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC25.46■■□□□ 1.67
KCNA3P22001 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC25.45■■□□□ 1.67
KCNA3P22001 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.67
KCNA3P22001 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
KCNA3P22001 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
KCNA3P22001 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
KCNA3P22001 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC25.45■■□□□ 1.66
KCNA3P22001 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
KCNA3P22001 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC25.45■■□□□ 1.66
KCNA3P22001 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC25.45■■□□□ 1.66
KCNA3P22001 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC25.45■■□□□ 1.66
KCNA3P22001 BRWD1-AS2-201ENST00000603064 1028 ntBASIC25.45■■□□□ 1.66
KCNA3P22001 AC116050.2-201ENST00000612102 1779 ntBASIC25.45■■□□□ 1.66
KCNA3P22001 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC25.45■■□□□ 1.66
KCNA3P22001 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
KCNA3P22001 AC079598.2-202ENST00000546624 1451 ntBASIC25.45■■□□□ 1.66
KCNA3P22001 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
KCNA3P22001 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
KCNA3P22001 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
KCNA3P22001 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
KCNA3P22001 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC25.44■■□□□ 1.66
KCNA3P22001 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC25.44■■□□□ 1.66
KCNA3P22001 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
KCNA3P22001 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
KCNA3P22001 AC010542.4-201ENST00000563151 1910 ntBASIC25.43■■□□□ 1.66
KCNA3P22001 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms