Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
KRT4P19013 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT4P19013 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT4P19013 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
KRT4P19013 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.61■□□□□ 0.89
KRT4P19013 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT4P19013 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT4P19013 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KRT4P19013 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT4P19013 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
KRT4P19013 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
KRT4P19013 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT4P19013 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.6■□□□□ 0.89
KRT4P19013 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.6■□□□□ 0.89
KRT4P19013 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT4P19013 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.6■□□□□ 0.89
KRT4P19013 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
KRT4P19013 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT4P19013 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KRT4P19013 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.6■□□□□ 0.89
KRT4P19013 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.6■□□□□ 0.89
KRT4P19013 AC087289.5-201ENST00000586076 3175 ntBASIC20.6■□□□□ 0.89
KRT4P19013 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KRT4P19013 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
KRT4P19013 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT4P19013 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KRT4P19013 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.59■□□□□ 0.89
KRT4P19013 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KRT4P19013 AL356441.2-201ENST00000443009 864 ntBASIC20.59■□□□□ 0.89
KRT4P19013 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KRT4P19013 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
KRT4P19013 AC233992.3-201ENST00000607491 485 ntBASIC20.59■□□□□ 0.89
KRT4P19013 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KRT4P19013 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KRT4P19013 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT4P19013 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
KRT4P19013 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.58■□□□□ 0.89
KRT4P19013 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KRT4P19013 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.58■□□□□ 0.89
KRT4P19013 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
KRT4P19013 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
KRT4P19013 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
KRT4P19013 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
KRT4P19013 AC131281.2-201ENST00000520478 145 ntBASIC20.58■□□□□ 0.89
KRT4P19013 IGHV3-19-201ENST00000521488 291 ntBASIC20.58■□□□□ 0.89
KRT4P19013 AC126544.1-201ENST00000580842 1059 ntBASIC20.58■□□□□ 0.89
KRT4P19013 MIR4767-201ENST00000582827 78 ntBASIC20.58■□□□□ 0.89
KRT4P19013 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.58■□□□□ 0.88
KRT4P19013 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.58■□□□□ 0.88
KRT4P19013 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.58■□□□□ 0.88
KRT4P19013 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KRT4P19013 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
KRT4P19013 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
KRT4P19013 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.58■□□□□ 0.88
KRT4P19013 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KRT4P19013 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT4P19013 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT4P19013 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT4P19013 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.57■□□□□ 0.88
KRT4P19013 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.57■□□□□ 0.88
KRT4P19013 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT4P19013 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.57■□□□□ 0.88
KRT4P19013 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT4P19013 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT4P19013 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT4P19013 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT4P19013 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
KRT4P19013 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT4P19013 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.57■□□□□ 0.88
KRT4P19013 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.57■□□□□ 0.88
KRT4P19013 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.57■□□□□ 0.88
KRT4P19013 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.57■□□□□ 0.88
KRT4P19013 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT4P19013 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.57■□□□□ 0.88
KRT4P19013 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT4P19013 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT4P19013 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT4P19013 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT4P19013 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KRT4P19013 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KRT4P19013 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT4P19013 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.57■□□□□ 0.88
KRT4P19013 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.57■□□□□ 0.88
KRT4P19013 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT4P19013 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
KRT4P19013 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.56■□□□□ 0.88
KRT4P19013 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.56■□□□□ 0.88
KRT4P19013 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT4P19013 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
KRT4P19013 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KRT4P19013 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KRT4P19013 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.56■□□□□ 0.88
KRT4P19013 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.56■□□□□ 0.88
KRT4P19013 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.56■□□□□ 0.88
KRT4P19013 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
KRT4P19013 TCF3P1-201ENST00000423021 1937 ntBASIC20.56■□□□□ 0.88
KRT4P19013 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.56■□□□□ 0.88
KRT4P19013 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KRT4P19013 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT4P19013 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms