Protein–RNA interactions for Protein: P08865

RPSA, 40S ribosomal protein SA, humanhuman

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPSAP08865 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPSAP08865 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.79■□□□□ 0.76
RPSAP08865 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.79■□□□□ 0.76
RPSAP08865 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPSAP08865 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPSAP08865 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPSAP08865 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPSAP08865 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.79■□□□□ 0.76
RPSAP08865 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RPSAP08865 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPSAP08865 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.79■□□□□ 0.76
RPSAP08865 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RPSAP08865 CA15P2-201ENST00000611168 834 ntBASIC19.79■□□□□ 0.76
RPSAP08865 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPSAP08865 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPSAP08865 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RPSAP08865 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.79■□□□□ 0.76
RPSAP08865 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPSAP08865 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPSAP08865 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPSAP08865 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPSAP08865 AC018470.1-201ENST00000624790 3129 ntBASIC19.78■□□□□ 0.76
RPSAP08865 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
RPSAP08865 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPSAP08865 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPSAP08865 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPSAP08865 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.78■□□□□ 0.76
RPSAP08865 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.78■□□□□ 0.76
RPSAP08865 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPSAP08865 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPSAP08865 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPSAP08865 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPSAP08865 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPSAP08865 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RPSAP08865 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
RPSAP08865 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPSAP08865 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPSAP08865 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPSAP08865 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPSAP08865 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.77■□□□□ 0.76
RPSAP08865 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPSAP08865 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RPSAP08865 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RPSAP08865 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPSAP08865 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.77■□□□□ 0.76
RPSAP08865 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.77■□□□□ 0.76
RPSAP08865 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.77■□□□□ 0.76
RPSAP08865 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RPSAP08865 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
RPSAP08865 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.77■□□□□ 0.76
RPSAP08865 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPSAP08865 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
RPSAP08865 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RPSAP08865 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RPSAP08865 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.77■□□□□ 0.75
RPSAP08865 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.76■□□□□ 0.75
RPSAP08865 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPSAP08865 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RPSAP08865 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.76■□□□□ 0.75
RPSAP08865 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPSAP08865 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPSAP08865 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RPSAP08865 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.76■□□□□ 0.75
RPSAP08865 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPSAP08865 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.76■□□□□ 0.75
RPSAP08865 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.76■□□□□ 0.75
RPSAP08865 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPSAP08865 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RPSAP08865 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPSAP08865 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.76■□□□□ 0.75
RPSAP08865 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPSAP08865 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RPSAP08865 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPSAP08865 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPSAP08865 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPSAP08865 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.75■□□□□ 0.75
RPSAP08865 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RPSAP08865 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPSAP08865 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.75■□□□□ 0.75
RPSAP08865 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RPSAP08865 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
RPSAP08865 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
RPSAP08865 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPSAP08865 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPSAP08865 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPSAP08865 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RPSAP08865 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPSAP08865 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPSAP08865 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPSAP08865 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.74■□□□□ 0.75
RPSAP08865 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.74■□□□□ 0.75
RPSAP08865 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.74■□□□□ 0.75
RPSAP08865 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.74■□□□□ 0.75
RPSAP08865 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPSAP08865 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.74■□□□□ 0.75
RPSAP08865 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPSAP08865 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPSAP08865 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RPSAP08865 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPSAP08865 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms