Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.34■□□□□ 0.69
PLOD3O60568 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.34■□□□□ 0.69
PLOD3O60568 PLK5-205ENST00000642079 1969 ntBASIC19.33■□□□□ 0.69
PLOD3O60568 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PLOD3O60568 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PLOD3O60568 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.33■□□□□ 0.69
PLOD3O60568 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.33■□□□□ 0.69
PLOD3O60568 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PLOD3O60568 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
PLOD3O60568 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
PLOD3O60568 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.33■□□□□ 0.69
PLOD3O60568 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PLOD3O60568 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PLOD3O60568 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PLOD3O60568 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.33■□□□□ 0.68
PLOD3O60568 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
PLOD3O60568 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.33■□□□□ 0.68
PLOD3O60568 AC137761.2-201ENST00000561729 223 ntBASIC19.33■□□□□ 0.68
PLOD3O60568 AC145350.3-201ENST00000569033 163 ntBASIC19.33■□□□□ 0.68
PLOD3O60568 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
PLOD3O60568 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.33■□□□□ 0.68
PLOD3O60568 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
PLOD3O60568 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PLOD3O60568 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
PLOD3O60568 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PLOD3O60568 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PLOD3O60568 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PLOD3O60568 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.33■□□□□ 0.68
PLOD3O60568 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PLOD3O60568 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PLOD3O60568 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PLOD3O60568 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PLOD3O60568 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PLOD3O60568 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PLOD3O60568 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.32■□□□□ 0.68
PLOD3O60568 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PLOD3O60568 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PLOD3O60568 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PLOD3O60568 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PLOD3O60568 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.32■□□□□ 0.68
PLOD3O60568 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.32■□□□□ 0.68
PLOD3O60568 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.32■□□□□ 0.68
PLOD3O60568 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.32■□□□□ 0.68
PLOD3O60568 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
PLOD3O60568 AC006128.1-201ENST00000624704 1661 ntBASIC19.32■□□□□ 0.68
PLOD3O60568 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PLOD3O60568 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PLOD3O60568 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.32■□□□□ 0.68
PLOD3O60568 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PLOD3O60568 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PLOD3O60568 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PLOD3O60568 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PLOD3O60568 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.32■□□□□ 0.68
PLOD3O60568 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PLOD3O60568 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PLOD3O60568 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PLOD3O60568 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PLOD3O60568 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PLOD3O60568 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PLOD3O60568 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PLOD3O60568 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PLOD3O60568 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PLOD3O60568 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PLOD3O60568 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PLOD3O60568 AC092667.1-201ENST00000434301 2586 ntBASIC19.31■□□□□ 0.68
PLOD3O60568 MIR935-201ENST00000401179 91 ntBASIC19.31■□□□□ 0.68
PLOD3O60568 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PLOD3O60568 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
PLOD3O60568 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PLOD3O60568 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PLOD3O60568 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.31■□□□□ 0.68
PLOD3O60568 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PLOD3O60568 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.31■□□□□ 0.68
PLOD3O60568 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PLOD3O60568 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PLOD3O60568 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.3■□□□□ 0.68
PLOD3O60568 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PLOD3O60568 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PLOD3O60568 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PLOD3O60568 AC006015.1-201ENST00000429970 570 ntBASIC19.3■□□□□ 0.68
PLOD3O60568 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.3■□□□□ 0.68
PLOD3O60568 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.3■□□□□ 0.68
PLOD3O60568 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.3■□□□□ 0.68
PLOD3O60568 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.3■□□□□ 0.68
PLOD3O60568 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PLOD3O60568 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PLOD3O60568 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.3■□□□□ 0.68
PLOD3O60568 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PLOD3O60568 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PLOD3O60568 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
PLOD3O60568 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
PLOD3O60568 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PLOD3O60568 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PLOD3O60568 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PLOD3O60568 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PLOD3O60568 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PLOD3O60568 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PLOD3O60568 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PLOD3O60568 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PLOD3O60568 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms