Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
TNRC18O15417 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TNRC18O15417 AC005332.1-201ENST00000577698 1310 ntBASIC22.78■■□□□ 1.24
TNRC18O15417 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC22.78■■□□□ 1.24
TNRC18O15417 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC22.77■■□□□ 1.24
TNRC18O15417 CLN6-221ENST00000637494 765 ntTSL 5 BASIC22.77■■□□□ 1.24
TNRC18O15417 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
TNRC18O15417 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
TNRC18O15417 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
TNRC18O15417 HMGN1P19-201ENST00000436976 333 ntBASIC22.77■■□□□ 1.24
TNRC18O15417 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
TNRC18O15417 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.23
TNRC18O15417 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.23
TNRC18O15417 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
TNRC18O15417 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
TNRC18O15417 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC22.76■■□□□ 1.23
TNRC18O15417 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TNRC18O15417 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
TNRC18O15417 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TNRC18O15417 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TNRC18O15417 AC116562.2-201ENST00000507042 360 ntBASIC22.76■■□□□ 1.23
TNRC18O15417 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
TNRC18O15417 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.76■■□□□ 1.23
TNRC18O15417 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
TNRC18O15417 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TNRC18O15417 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC22.75■■□□□ 1.23
TNRC18O15417 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TNRC18O15417 AL022342.1-201ENST00000400363 863 ntBASIC22.75■■□□□ 1.23
TNRC18O15417 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC22.75■■□□□ 1.23
TNRC18O15417 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC22.75■■□□□ 1.23
TNRC18O15417 AL121956.5-201ENST00000625261 221 ntBASIC22.75■■□□□ 1.23
TNRC18O15417 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
TNRC18O15417 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TNRC18O15417 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
TNRC18O15417 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
TNRC18O15417 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TNRC18O15417 AC117947.1-201ENST00000427448 529 ntBASIC22.74■■□□□ 1.23
TNRC18O15417 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
TNRC18O15417 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
TNRC18O15417 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
TNRC18O15417 RN7SL510P-201ENST00000581311 263 ntBASIC22.74■■□□□ 1.23
TNRC18O15417 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC22.74■■□□□ 1.23
TNRC18O15417 IER3-202ENST00000376377 1350 ntBASIC22.74■■□□□ 1.23
TNRC18O15417 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC22.74■■□□□ 1.23
TNRC18O15417 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.74■■□□□ 1.23
TNRC18O15417 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
TNRC18O15417 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TNRC18O15417 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC22.73■■□□□ 1.23
TNRC18O15417 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
TNRC18O15417 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC22.73■■□□□ 1.23
TNRC18O15417 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC22.73■■□□□ 1.23
TNRC18O15417 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
TNRC18O15417 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TNRC18O15417 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC22.73■■□□□ 1.23
TNRC18O15417 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC22.73■■□□□ 1.23
TNRC18O15417 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC22.73■■□□□ 1.23
TNRC18O15417 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
TNRC18O15417 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TNRC18O15417 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TNRC18O15417 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TNRC18O15417 YBX1P2-201ENST00000489612 999 ntBASIC22.72■■□□□ 1.23
TNRC18O15417 GPX4-207ENST00000589115 812 ntTSL 2 BASIC22.72■■□□□ 1.23
TNRC18O15417 AC139887.4-201ENST00000607877 719 ntBASIC22.72■■□□□ 1.23
TNRC18O15417 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TNRC18O15417 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TNRC18O15417 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TNRC18O15417 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.72■■□□□ 1.23
TNRC18O15417 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TNRC18O15417 PRR31-201ENST00000371629 978 ntTSL 2 BASIC22.72■■□□□ 1.23
TNRC18O15417 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC22.72■■□□□ 1.23
TNRC18O15417 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC22.72■■□□□ 1.23
TNRC18O15417 AC008622.2-201ENST00000617006 1229 ntBASIC22.72■■□□□ 1.23
TNRC18O15417 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TNRC18O15417 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TNRC18O15417 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.71■■□□□ 1.23
TNRC18O15417 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
TNRC18O15417 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
TNRC18O15417 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
TNRC18O15417 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TNRC18O15417 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TNRC18O15417 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TNRC18O15417 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
TNRC18O15417 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TNRC18O15417 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TNRC18O15417 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC22.71■■□□□ 1.23
TNRC18O15417 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC22.71■■□□□ 1.23
TNRC18O15417 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TNRC18O15417 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TNRC18O15417 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
TNRC18O15417 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TNRC18O15417 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC22.71■■□□□ 1.23
TNRC18O15417 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC22.71■■□□□ 1.23
TNRC18O15417 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC22.71■■□□□ 1.23
TNRC18O15417 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TNRC18O15417 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
TNRC18O15417 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
TNRC18O15417 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.7■■□□□ 1.22
TNRC18O15417 INGX-201ENST00000359239 846 ntBASIC22.7■■□□□ 1.22
TNRC18O15417 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
TNRC18O15417 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms