Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AP000550.4-202ENST00000639755 178 ntBASIC35.67■■■■□ 3.3
CUX2O14529 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC35.66■■■■□ 3.3
CUX2O14529 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC35.66■■■■□ 3.3
CUX2O14529 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC35.66■■■■□ 3.3
CUX2O14529 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
CUX2O14529 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
CUX2O14529 THRA-202ENST00000394121 2260 ntTSL 2 BASIC35.66■■■■□ 3.3
CUX2O14529 AC027702.1-201ENST00000563810 1770 ntBASIC35.66■■■■□ 3.3
CUX2O14529 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
CUX2O14529 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC35.66■■■■□ 3.3
CUX2O14529 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
CUX2O14529 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
CUX2O14529 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
CUX2O14529 AC063952.2-201ENST00000498792 1227 ntBASIC35.66■■■■□ 3.3
CUX2O14529 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC35.66■■■■□ 3.3
CUX2O14529 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC35.65■■■■□ 3.3
CUX2O14529 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC35.65■■■■□ 3.3
CUX2O14529 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC35.65■■■■□ 3.3
CUX2O14529 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC35.65■■■■□ 3.3
CUX2O14529 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
CUX2O14529 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC35.65■■■■□ 3.3
CUX2O14529 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC35.65■■■■□ 3.3
CUX2O14529 FITM1-202ENST00000559294 800 ntBASIC35.65■■■■□ 3.3
CUX2O14529 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC35.64■■■■□ 3.3
CUX2O14529 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC35.64■■■■□ 3.3
CUX2O14529 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
CUX2O14529 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC35.64■■■■□ 3.3
CUX2O14529 LGALS8-AS1-201ENST00000487567 1457 ntBASIC35.64■■■■□ 3.3
CUX2O14529 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC35.64■■■■□ 3.3
CUX2O14529 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
CUX2O14529 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC35.64■■■■□ 3.3
CUX2O14529 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC35.64■■■■□ 3.3
CUX2O14529 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC35.64■■■■□ 3.3
CUX2O14529 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
CUX2O14529 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
CUX2O14529 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
CUX2O14529 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
CUX2O14529 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
CUX2O14529 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC35.63■■■■□ 3.29
CUX2O14529 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC35.63■■■■□ 3.29
CUX2O14529 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC35.63■■■■□ 3.29
CUX2O14529 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC35.63■■■■□ 3.29
CUX2O14529 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
CUX2O14529 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
CUX2O14529 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC35.62■■■■□ 3.29
CUX2O14529 AP000593.1-201ENST00000393668 712 ntBASIC35.62■■■■□ 3.29
CUX2O14529 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC35.62■■■■□ 3.29
CUX2O14529 AL390955.1-201ENST00000428694 934 ntBASIC35.62■■■■□ 3.29
CUX2O14529 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC35.62■■■■□ 3.29
CUX2O14529 LINC01238-205ENST00000567549 1107 ntBASIC35.62■■■■□ 3.29
CUX2O14529 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC35.62■■■■□ 3.29
CUX2O14529 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC35.62■■■■□ 3.29
CUX2O14529 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC35.62■■■■□ 3.29
CUX2O14529 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC35.62■■■■□ 3.29
CUX2O14529 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC35.62■■■■□ 3.29
CUX2O14529 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC35.61■■■■□ 3.29
CUX2O14529 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC35.61■■■■□ 3.29
CUX2O14529 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC35.61■■■■□ 3.29
CUX2O14529 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
CUX2O14529 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC35.61■■■■□ 3.29
CUX2O14529 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC35.61■■■■□ 3.29
CUX2O14529 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC35.61■■■■□ 3.29
CUX2O14529 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC35.61■■■■□ 3.29
CUX2O14529 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC35.61■■■■□ 3.29
CUX2O14529 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC35.61■■■■□ 3.29
CUX2O14529 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC35.61■■■■□ 3.29
CUX2O14529 HTR7P1-201ENST00000538670 1336 ntBASIC35.61■■■■□ 3.29
CUX2O14529 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
CUX2O14529 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC35.6■■■■□ 3.29
CUX2O14529 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC35.6■■■■□ 3.29
CUX2O14529 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
CUX2O14529 AC061975.6-201ENST00000579045 1553 ntBASIC35.6■■■■□ 3.29
CUX2O14529 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
CUX2O14529 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC35.6■■■■□ 3.29
CUX2O14529 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC35.6■■■■□ 3.29
CUX2O14529 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC35.6■■■■□ 3.29
CUX2O14529 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC35.6■■■■□ 3.29
CUX2O14529 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
CUX2O14529 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC35.59■■■■□ 3.29
CUX2O14529 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
CUX2O14529 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
CUX2O14529 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
CUX2O14529 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC35.59■■■■□ 3.29
CUX2O14529 DBP-204ENST00000599385 709 ntTSL 3 BASIC35.59■■■■□ 3.29
CUX2O14529 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC35.59■■■■□ 3.29
CUX2O14529 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC35.59■■■■□ 3.29
CUX2O14529 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC35.58■■■■□ 3.29
CUX2O14529 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC35.58■■■■□ 3.29
CUX2O14529 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC35.58■■■■□ 3.29
CUX2O14529 PVRIG2P-201ENST00000435460 978 ntBASIC35.58■■■■□ 3.29
CUX2O14529 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC35.58■■■■□ 3.29
CUX2O14529 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC35.58■■■■□ 3.29
CUX2O14529 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC35.58■■■■□ 3.29
CUX2O14529 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC35.57■■■■□ 3.29
CUX2O14529 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC35.57■■■■□ 3.28
CUX2O14529 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC35.57■■■■□ 3.28
CUX2O14529 AL031133.1-201ENST00000406807 723 ntBASIC35.57■■■■□ 3.28
CUX2O14529 VMO1-204ENST00000441199 741 ntTSL 2 BASIC35.57■■■■□ 3.28
CUX2O14529 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC35.57■■■■□ 3.28
CUX2O14529 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC35.57■■■■□ 3.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms