Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SOX1O00570 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SOX1O00570 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SOX1O00570 COPE-203ENST00000351079 907 ntTSL 2 BASIC22.15■■□□□ 1.14
SOX1O00570 AL031133.1-201ENST00000406807 723 ntBASIC22.15■■□□□ 1.14
SOX1O00570 AK4P3-201ENST00000418260 669 ntBASIC22.15■■□□□ 1.14
SOX1O00570 AC063952.2-201ENST00000498792 1227 ntBASIC22.15■■□□□ 1.14
SOX1O00570 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC22.15■■□□□ 1.14
SOX1O00570 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC22.15■■□□□ 1.14
SOX1O00570 GPALPP1-207ENST00000611650 899 ntBASIC22.15■■□□□ 1.14
SOX1O00570 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC22.15■■□□□ 1.14
SOX1O00570 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC22.15■■□□□ 1.14
SOX1O00570 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SOX1O00570 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
SOX1O00570 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
SOX1O00570 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
SOX1O00570 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
SOX1O00570 LIN28AP1-201ENST00000429574 405 ntBASIC22.14■■□□□ 1.13
SOX1O00570 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
SOX1O00570 ATP5G1P1-201ENST00000448724 379 ntBASIC22.14■■□□□ 1.13
SOX1O00570 KRT16P5-201ENST00000455284 522 ntBASIC22.14■■□□□ 1.13
SOX1O00570 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.14■■□□□ 1.13
SOX1O00570 CLN6-204ENST00000564752 900 ntTSL 3 BASIC22.14■■□□□ 1.13
SOX1O00570 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
SOX1O00570 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC22.14■■□□□ 1.13
SOX1O00570 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC22.14■■□□□ 1.13
SOX1O00570 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC22.14■■□□□ 1.13
SOX1O00570 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SOX1O00570 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SOX1O00570 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SOX1O00570 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SOX1O00570 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SOX1O00570 AP000550.4-202ENST00000639755 178 ntBASIC22.13■■□□□ 1.13
SOX1O00570 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC22.13■■□□□ 1.13
SOX1O00570 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SOX1O00570 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
SOX1O00570 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SOX1O00570 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
SOX1O00570 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SOX1O00570 AL139125.2-201ENST00000623134 1869 ntBASIC22.12■■□□□ 1.13
SOX1O00570 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SOX1O00570 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC22.12■■□□□ 1.13
SOX1O00570 MED25-212ENST00000618715 1467 ntTSL 5 BASIC22.12■■□□□ 1.13
SOX1O00570 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC22.12■■□□□ 1.13
SOX1O00570 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
SOX1O00570 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
SOX1O00570 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC22.12■■□□□ 1.13
SOX1O00570 AP000347.1-202ENST00000435868 847 ntBASIC22.12■■□□□ 1.13
SOX1O00570 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC22.12■■□□□ 1.13
SOX1O00570 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC22.12■■□□□ 1.13
SOX1O00570 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SOX1O00570 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC22.12■■□□□ 1.13
SOX1O00570 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC22.12■■□□□ 1.13
SOX1O00570 CLN6-221ENST00000637494 765 ntTSL 5 BASIC22.12■■□□□ 1.13
SOX1O00570 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SOX1O00570 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SOX1O00570 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC22.12■■□□□ 1.13
SOX1O00570 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
SOX1O00570 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SOX1O00570 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SOX1O00570 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SOX1O00570 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SOX1O00570 AC007322.3-201ENST00000426526 701 ntBASIC22.11■■□□□ 1.13
SOX1O00570 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC22.11■■□□□ 1.13
SOX1O00570 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC22.11■■□□□ 1.13
SOX1O00570 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SOX1O00570 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SOX1O00570 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SOX1O00570 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC22.11■■□□□ 1.13
SOX1O00570 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC22.11■■□□□ 1.13
SOX1O00570 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SOX1O00570 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC22.1■■□□□ 1.13
SOX1O00570 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.1■■□□□ 1.13
SOX1O00570 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
SOX1O00570 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SOX1O00570 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SOX1O00570 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
SOX1O00570 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
SOX1O00570 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC22.1■■□□□ 1.13
SOX1O00570 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC22.1■■□□□ 1.13
SOX1O00570 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC22.1■■□□□ 1.13
SOX1O00570 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC22.1■■□□□ 1.13
SOX1O00570 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC22.1■■□□□ 1.13
SOX1O00570 CLEC4GP1-201ENST00000596555 870 ntBASIC22.1■■□□□ 1.13
SOX1O00570 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC22.1■■□□□ 1.13
SOX1O00570 CLN6-214ENST00000636314 442 ntTSL 3 BASIC22.1■■□□□ 1.13
SOX1O00570 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SOX1O00570 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SOX1O00570 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SOX1O00570 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC22.09■■□□□ 1.13
SOX1O00570 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.09■■□□□ 1.13
SOX1O00570 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SOX1O00570 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC22.09■■□□□ 1.13
SOX1O00570 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
SOX1O00570 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
SOX1O00570 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
SOX1O00570 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SOX1O00570 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
SOX1O00570 PVRIG2P-201ENST00000435460 978 ntBASIC22.09■■□□□ 1.13
SOX1O00570 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms