Protein–RNA interactions for Protein: B8ZZ34

SHISA8, Putative protein shisa-8, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA8B8ZZ34 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHISA8B8ZZ34 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHISA8B8ZZ34 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SHISA8B8ZZ34 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.66■□□□□ 0.58
SHISA8B8ZZ34 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SHISA8B8ZZ34 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SHISA8B8ZZ34 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHISA8B8ZZ34 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.66■□□□□ 0.58
SHISA8B8ZZ34 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
SHISA8B8ZZ34 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.66■□□□□ 0.58
SHISA8B8ZZ34 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHISA8B8ZZ34 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHISA8B8ZZ34 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SHISA8B8ZZ34 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SHISA8B8ZZ34 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHISA8B8ZZ34 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SHISA8B8ZZ34 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SHISA8B8ZZ34 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SHISA8B8ZZ34 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHISA8B8ZZ34 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHISA8B8ZZ34 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SHISA8B8ZZ34 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SHISA8B8ZZ34 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHISA8B8ZZ34 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHISA8B8ZZ34 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHISA8B8ZZ34 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.65■□□□□ 0.58
SHISA8B8ZZ34 RARRES2P4-201ENST00000514074 484 ntBASIC18.65■□□□□ 0.58
SHISA8B8ZZ34 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHISA8B8ZZ34 AC105036.2-201ENST00000569468 176 ntBASIC18.65■□□□□ 0.58
SHISA8B8ZZ34 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHISA8B8ZZ34 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SHISA8B8ZZ34 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SHISA8B8ZZ34 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.65■□□□□ 0.58
SHISA8B8ZZ34 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHISA8B8ZZ34 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SHISA8B8ZZ34 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
SHISA8B8ZZ34 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SHISA8B8ZZ34 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SHISA8B8ZZ34 AC011484.1-201ENST00000377652 1995 ntBASIC18.64■□□□□ 0.58
SHISA8B8ZZ34 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
SHISA8B8ZZ34 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHISA8B8ZZ34 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SHISA8B8ZZ34 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHISA8B8ZZ34 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHISA8B8ZZ34 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHISA8B8ZZ34 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.64■□□□□ 0.57
SHISA8B8ZZ34 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.64■□□□□ 0.57
SHISA8B8ZZ34 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.64■□□□□ 0.57
SHISA8B8ZZ34 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.64■□□□□ 0.57
SHISA8B8ZZ34 AC083906.2-201ENST00000511578 360 ntBASIC18.64■□□□□ 0.57
SHISA8B8ZZ34 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.64■□□□□ 0.57
SHISA8B8ZZ34 AC069236.1-201ENST00000604339 616 ntBASIC18.64■□□□□ 0.57
SHISA8B8ZZ34 AC008694.1-202ENST00000636953 945 ntBASIC18.64■□□□□ 0.57
SHISA8B8ZZ34 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHISA8B8ZZ34 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SHISA8B8ZZ34 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.64■□□□□ 0.57
SHISA8B8ZZ34 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SHISA8B8ZZ34 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHISA8B8ZZ34 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHISA8B8ZZ34 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SHISA8B8ZZ34 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHISA8B8ZZ34 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHISA8B8ZZ34 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.63■□□□□ 0.57
SHISA8B8ZZ34 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHISA8B8ZZ34 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHISA8B8ZZ34 NCF1B-203ENST00000435988 1254 ntBASIC18.63■□□□□ 0.57
SHISA8B8ZZ34 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.63■□□□□ 0.57
SHISA8B8ZZ34 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.63■□□□□ 0.57
SHISA8B8ZZ34 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.63■□□□□ 0.57
SHISA8B8ZZ34 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.63■□□□□ 0.57
SHISA8B8ZZ34 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHISA8B8ZZ34 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHISA8B8ZZ34 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SHISA8B8ZZ34 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHISA8B8ZZ34 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHISA8B8ZZ34 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.63■□□□□ 0.57
SHISA8B8ZZ34 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHISA8B8ZZ34 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHISA8B8ZZ34 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.63■□□□□ 0.57
SHISA8B8ZZ34 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.63■□□□□ 0.57
SHISA8B8ZZ34 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHISA8B8ZZ34 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHISA8B8ZZ34 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHISA8B8ZZ34 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.62■□□□□ 0.57
SHISA8B8ZZ34 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHISA8B8ZZ34 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHISA8B8ZZ34 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHISA8B8ZZ34 HLA-L-209ENST00000420110 1011 ntBASIC18.62■□□□□ 0.57
SHISA8B8ZZ34 AL355472.2-201ENST00000422958 438 ntBASIC18.62■□□□□ 0.57
SHISA8B8ZZ34 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.62■□□□□ 0.57
SHISA8B8ZZ34 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.62■□□□□ 0.57
SHISA8B8ZZ34 AF201337.1-201ENST00000520239 748 ntBASIC18.62■□□□□ 0.57
SHISA8B8ZZ34 FAM21FP-204ENST00000608637 956 ntBASIC18.62■□□□□ 0.57
SHISA8B8ZZ34 AL121832.2-201ENST00000610979 668 ntBASIC18.62■□□□□ 0.57
SHISA8B8ZZ34 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SHISA8B8ZZ34 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SHISA8B8ZZ34 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SHISA8B8ZZ34 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SHISA8B8ZZ34 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SHISA8B8ZZ34 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms