Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MEIS3P1A6NDR6 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.59■□□□□ 0.41
MEIS3P1A6NDR6 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MEIS3P1A6NDR6 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
MEIS3P1A6NDR6 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
MEIS3P1A6NDR6 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MEIS3P1A6NDR6 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
MEIS3P1A6NDR6 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MEIS3P1A6NDR6 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.41
MEIS3P1A6NDR6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
MEIS3P1A6NDR6 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.58■□□□□ 0.4
MEIS3P1A6NDR6 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
MEIS3P1A6NDR6 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
MEIS3P1A6NDR6 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
MEIS3P1A6NDR6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.58■□□□□ 0.4
MEIS3P1A6NDR6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.58■□□□□ 0.4
MEIS3P1A6NDR6 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.58■□□□□ 0.4
MEIS3P1A6NDR6 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.58■□□□□ 0.4
MEIS3P1A6NDR6 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MEIS3P1A6NDR6 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.58■□□□□ 0.4
MEIS3P1A6NDR6 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.58■□□□□ 0.4
MEIS3P1A6NDR6 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
MEIS3P1A6NDR6 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.58■□□□□ 0.4
MEIS3P1A6NDR6 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MEIS3P1A6NDR6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.58■□□□□ 0.4
MEIS3P1A6NDR6 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.58■□□□□ 0.4
MEIS3P1A6NDR6 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
MEIS3P1A6NDR6 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
MEIS3P1A6NDR6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
MEIS3P1A6NDR6 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MEIS3P1A6NDR6 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MEIS3P1A6NDR6 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MEIS3P1A6NDR6 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MEIS3P1A6NDR6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
MEIS3P1A6NDR6 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
MEIS3P1A6NDR6 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MEIS3P1A6NDR6 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MEIS3P1A6NDR6 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MEIS3P1A6NDR6 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.57■□□□□ 0.4
MEIS3P1A6NDR6 RARRES2P1-201ENST00000474487 481 ntBASIC17.57■□□□□ 0.4
MEIS3P1A6NDR6 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MEIS3P1A6NDR6 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.57■□□□□ 0.4
MEIS3P1A6NDR6 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
MEIS3P1A6NDR6 AC116562.4-201ENST00000641316 2276 ntBASIC17.57■□□□□ 0.4
MEIS3P1A6NDR6 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MEIS3P1A6NDR6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MEIS3P1A6NDR6 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.57■□□□□ 0.4
MEIS3P1A6NDR6 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MEIS3P1A6NDR6 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MEIS3P1A6NDR6 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
MEIS3P1A6NDR6 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MEIS3P1A6NDR6 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MEIS3P1A6NDR6 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MEIS3P1A6NDR6 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MEIS3P1A6NDR6 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
MEIS3P1A6NDR6 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MEIS3P1A6NDR6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.56■□□□□ 0.4
MEIS3P1A6NDR6 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
MEIS3P1A6NDR6 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
MEIS3P1A6NDR6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.56■□□□□ 0.4
MEIS3P1A6NDR6 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
MEIS3P1A6NDR6 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MEIS3P1A6NDR6 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MEIS3P1A6NDR6 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.56■□□□□ 0.4
MEIS3P1A6NDR6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.56■□□□□ 0.4
MEIS3P1A6NDR6 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MEIS3P1A6NDR6 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MEIS3P1A6NDR6 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MEIS3P1A6NDR6 SRD5A1P1-201ENST00000442297 786 ntBASIC17.56■□□□□ 0.4
MEIS3P1A6NDR6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
MEIS3P1A6NDR6 SLC47A1P1-202ENST00000449666 945 ntBASIC17.56■□□□□ 0.4
MEIS3P1A6NDR6 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
MEIS3P1A6NDR6 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
MEIS3P1A6NDR6 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MEIS3P1A6NDR6 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MEIS3P1A6NDR6 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MEIS3P1A6NDR6 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
MEIS3P1A6NDR6 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MEIS3P1A6NDR6 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.55■□□□□ 0.4
MEIS3P1A6NDR6 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.55■□□□□ 0.4
MEIS3P1A6NDR6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.55■□□□□ 0.4
MEIS3P1A6NDR6 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MEIS3P1A6NDR6 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MEIS3P1A6NDR6 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MEIS3P1A6NDR6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MEIS3P1A6NDR6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MEIS3P1A6NDR6 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MEIS3P1A6NDR6 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.55■□□□□ 0.4
MEIS3P1A6NDR6 SMG8-203ENST00000578922 2178 ntBASIC17.55■□□□□ 0.4
MEIS3P1A6NDR6 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MEIS3P1A6NDR6 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.55■□□□□ 0.4
MEIS3P1A6NDR6 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MEIS3P1A6NDR6 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.55■□□□□ 0.4
MEIS3P1A6NDR6 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MEIS3P1A6NDR6 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MEIS3P1A6NDR6 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.55■□□□□ 0.4
MEIS3P1A6NDR6 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.55■□□□□ 0.4
MEIS3P1A6NDR6 AL356740.2-201ENST00000601559 647 ntBASIC17.55■□□□□ 0.4
MEIS3P1A6NDR6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.55■□□□□ 0.4
MEIS3P1A6NDR6 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms