Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
TRAV34A0A0B4J273 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV34A0A0B4J273 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRAV34A0A0B4J273 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC15.87■□□□□ 0.13
TRAV34A0A0B4J273 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV34A0A0B4J273 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC15.87■□□□□ 0.13
TRAV34A0A0B4J273 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV34A0A0B4J273 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV34A0A0B4J273 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV34A0A0B4J273 AC099791.2-201ENST00000605725 427 ntBASIC15.87■□□□□ 0.13
TRAV34A0A0B4J273 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV34A0A0B4J273 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV34A0A0B4J273 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV34A0A0B4J273 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV34A0A0B4J273 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV34A0A0B4J273 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV34A0A0B4J273 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV34A0A0B4J273 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV34A0A0B4J273 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
TRAV34A0A0B4J273 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV34A0A0B4J273 BID-204ENST00000399767 2129 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV34A0A0B4J273 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV34A0A0B4J273 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TRAV34A0A0B4J273 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAV34A0A0B4J273 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV34A0A0B4J273 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TRAV34A0A0B4J273 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV34A0A0B4J273 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV34A0A0B4J273 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV34A0A0B4J273 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TRAV34A0A0B4J273 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV34A0A0B4J273 OR2I1P-207ENST00000453522 948 ntBASIC15.86■□□□□ 0.13
TRAV34A0A0B4J273 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
TRAV34A0A0B4J273 AC010525.1-201ENST00000585559 441 ntBASIC15.86■□□□□ 0.13
TRAV34A0A0B4J273 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TRAV34A0A0B4J273 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV34A0A0B4J273 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV34A0A0B4J273 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TRAV34A0A0B4J273 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV34A0A0B4J273 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV34A0A0B4J273 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV34A0A0B4J273 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV34A0A0B4J273 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TRAV34A0A0B4J273 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
TRAV34A0A0B4J273 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV34A0A0B4J273 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV34A0A0B4J273 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV34A0A0B4J273 AC007225.1-201ENST00000566331 1836 ntBASIC15.85■□□□□ 0.13
TRAV34A0A0B4J273 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV34A0A0B4J273 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV34A0A0B4J273 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TRAV34A0A0B4J273 AC239859.2-201ENST00000444165 318 ntBASIC15.85■□□□□ 0.13
TRAV34A0A0B4J273 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV34A0A0B4J273 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV34A0A0B4J273 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV34A0A0B4J273 AC120498.9-201ENST00000339021 3867 ntBASIC15.85■□□□□ 0.13
TRAV34A0A0B4J273 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV34A0A0B4J273 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV34A0A0B4J273 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TRAV34A0A0B4J273 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV34A0A0B4J273 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV34A0A0B4J273 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV34A0A0B4J273 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV34A0A0B4J273 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV34A0A0B4J273 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
TRAV34A0A0B4J273 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
TRAV34A0A0B4J273 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRAV34A0A0B4J273 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TRAV34A0A0B4J273 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAV34A0A0B4J273 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV34A0A0B4J273 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC15.84■□□□□ 0.13
TRAV34A0A0B4J273 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAV34A0A0B4J273 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
TRAV34A0A0B4J273 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRAV34A0A0B4J273 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV34A0A0B4J273 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAV34A0A0B4J273 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TRAV34A0A0B4J273 MIR3181-201ENST00000578512 73 ntBASIC15.84■□□□□ 0.13
TRAV34A0A0B4J273 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC15.84■□□□□ 0.13
TRAV34A0A0B4J273 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV34A0A0B4J273 NARF-205ENST00000412079 1760 ntTSL 5 BASIC15.84■□□□□ 0.13
TRAV34A0A0B4J273 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAV34A0A0B4J273 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV34A0A0B4J273 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV34A0A0B4J273 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAV34A0A0B4J273 DET1-207ENST00000564406 2315 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAV34A0A0B4J273 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
TRAV34A0A0B4J273 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV34A0A0B4J273 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV34A0A0B4J273 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV34A0A0B4J273 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAV34A0A0B4J273 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV34A0A0B4J273 AC020763.4-201ENST00000623414 4170 ntBASIC15.83■□□□□ 0.13
TRAV34A0A0B4J273 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
TRAV34A0A0B4J273 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV34A0A0B4J273 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV34A0A0B4J273 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV34A0A0B4J273 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV34A0A0B4J273 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV34A0A0B4J273 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms