Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRAV12-3A0A0B4J271 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV12-3A0A0B4J271 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV12-3A0A0B4J271 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRAV12-3A0A0B4J271 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAV12-3A0A0B4J271 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAV12-3A0A0B4J271 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV12-3A0A0B4J271 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV12-3A0A0B4J271 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.27■□□□□ 0.03
TRAV12-3A0A0B4J271 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV12-3A0A0B4J271 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TRAV12-3A0A0B4J271 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV12-3A0A0B4J271 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV12-3A0A0B4J271 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV12-3A0A0B4J271 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV12-3A0A0B4J271 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC15.27■□□□□ 0.03
TRAV12-3A0A0B4J271 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
TRAV12-3A0A0B4J271 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV12-3A0A0B4J271 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV12-3A0A0B4J271 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV12-3A0A0B4J271 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV12-3A0A0B4J271 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV12-3A0A0B4J271 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV12-3A0A0B4J271 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV12-3A0A0B4J271 AC092667.1-201ENST00000434301 2586 ntBASIC15.26■□□□□ 0.03
TRAV12-3A0A0B4J271 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRAV12-3A0A0B4J271 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV12-3A0A0B4J271 AC027612.3-201ENST00000413684 1047 ntBASIC15.26■□□□□ 0.03
TRAV12-3A0A0B4J271 SERP1-208ENST00000491660 830 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV12-3A0A0B4J271 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV12-3A0A0B4J271 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV12-3A0A0B4J271 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV12-3A0A0B4J271 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC15.26■□□□□ 0.03
TRAV12-3A0A0B4J271 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV12-3A0A0B4J271 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV12-3A0A0B4J271 SLC25A24-204ENST00000569674 2357 ntBASIC15.26■□□□□ 0.03
TRAV12-3A0A0B4J271 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV12-3A0A0B4J271 LINC02228-203ENST00000641970 1355 ntBASIC15.25■□□□□ 0.03
TRAV12-3A0A0B4J271 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV12-3A0A0B4J271 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV12-3A0A0B4J271 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV12-3A0A0B4J271 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRAV12-3A0A0B4J271 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV12-3A0A0B4J271 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV12-3A0A0B4J271 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV12-3A0A0B4J271 AK1-201ENST00000223836 736 ntTSL 3 BASIC15.25■□□□□ 0.03
TRAV12-3A0A0B4J271 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV12-3A0A0B4J271 POU5F1P4-201ENST00000413175 1085 ntBASIC15.25■□□□□ 0.03
TRAV12-3A0A0B4J271 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV12-3A0A0B4J271 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV12-3A0A0B4J271 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV12-3A0A0B4J271 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV12-3A0A0B4J271 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV12-3A0A0B4J271 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TRAV12-3A0A0B4J271 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV12-3A0A0B4J271 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV12-3A0A0B4J271 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV12-3A0A0B4J271 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TRAV12-3A0A0B4J271 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV12-3A0A0B4J271 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV12-3A0A0B4J271 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRAV12-3A0A0B4J271 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV12-3A0A0B4J271 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TRAV12-3A0A0B4J271 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV12-3A0A0B4J271 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV12-3A0A0B4J271 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV12-3A0A0B4J271 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV12-3A0A0B4J271 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRAV12-3A0A0B4J271 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV12-3A0A0B4J271 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRAV12-3A0A0B4J271 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV12-3A0A0B4J271 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV12-3A0A0B4J271 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV12-3A0A0B4J271 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC15.24■□□□□ 0.03
TRAV12-3A0A0B4J271 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV12-3A0A0B4J271 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV12-3A0A0B4J271 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC15.24■□□□□ 0.03
TRAV12-3A0A0B4J271 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV12-3A0A0B4J271 AC120498.10-201ENST00000621827 505 ntBASIC15.24■□□□□ 0.03
TRAV12-3A0A0B4J271 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV12-3A0A0B4J271 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV12-3A0A0B4J271 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV12-3A0A0B4J271 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV12-3A0A0B4J271 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
TRAV12-3A0A0B4J271 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV12-3A0A0B4J271 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TRAV12-3A0A0B4J271 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV12-3A0A0B4J271 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV12-3A0A0B4J271 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV12-3A0A0B4J271 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV12-3A0A0B4J271 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV12-3A0A0B4J271 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV12-3A0A0B4J271 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV12-3A0A0B4J271 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV12-3A0A0B4J271 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV12-3A0A0B4J271 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV12-3A0A0B4J271 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TRAV12-3A0A0B4J271 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV12-3A0A0B4J271 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV12-3A0A0B4J271 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms