Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV3A0A0B4J244 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV3A0A0B4J244 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV3A0A0B4J244 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAV3A0A0B4J244 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAV3A0A0B4J244 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV3A0A0B4J244 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV3A0A0B4J244 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV3A0A0B4J244 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV3A0A0B4J244 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV3A0A0B4J244 AL121603.2-201ENST00000557373 2117 ntBASIC16.55■□□□□ 0.24
TRAV3A0A0B4J244 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
TRAV3A0A0B4J244 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TRAV3A0A0B4J244 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TRAV3A0A0B4J244 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV3A0A0B4J244 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV3A0A0B4J244 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV3A0A0B4J244 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV3A0A0B4J244 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV3A0A0B4J244 POU5F1P4-201ENST00000413175 1085 ntBASIC16.55■□□□□ 0.24
TRAV3A0A0B4J244 AC005837.3-201ENST00000612163 286 ntBASIC16.55■□□□□ 0.24
TRAV3A0A0B4J244 RARRES2P11-201ENST00000635158 484 ntBASIC16.55■□□□□ 0.24
TRAV3A0A0B4J244 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV3A0A0B4J244 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAV3A0A0B4J244 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV3A0A0B4J244 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV3A0A0B4J244 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV3A0A0B4J244 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TRAV3A0A0B4J244 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAV3A0A0B4J244 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TRAV3A0A0B4J244 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV3A0A0B4J244 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAV3A0A0B4J244 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV3A0A0B4J244 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAV3A0A0B4J244 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRAV3A0A0B4J244 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV3A0A0B4J244 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV3A0A0B4J244 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAV3A0A0B4J244 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV3A0A0B4J244 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
TRAV3A0A0B4J244 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAV3A0A0B4J244 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV3A0A0B4J244 AL162377.1-201ENST00000618844 1793 ntBASIC16.54■□□□□ 0.24
TRAV3A0A0B4J244 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV3A0A0B4J244 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV3A0A0B4J244 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV3A0A0B4J244 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV3A0A0B4J244 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV3A0A0B4J244 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV3A0A0B4J244 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.53■□□□□ 0.24
TRAV3A0A0B4J244 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV3A0A0B4J244 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV3A0A0B4J244 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV3A0A0B4J244 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV3A0A0B4J244 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV3A0A0B4J244 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TRAV3A0A0B4J244 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV3A0A0B4J244 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV3A0A0B4J244 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV3A0A0B4J244 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
TRAV3A0A0B4J244 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV3A0A0B4J244 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV3A0A0B4J244 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV3A0A0B4J244 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.53■□□□□ 0.24
TRAV3A0A0B4J244 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV3A0A0B4J244 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV3A0A0B4J244 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV3A0A0B4J244 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.52■□□□□ 0.24
TRAV3A0A0B4J244 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV3A0A0B4J244 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV3A0A0B4J244 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV3A0A0B4J244 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.52■□□□□ 0.24
TRAV3A0A0B4J244 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
TRAV3A0A0B4J244 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV3A0A0B4J244 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.52■□□□□ 0.24
TRAV3A0A0B4J244 AC138907.5-202ENST00000569484 235 ntBASIC16.52■□□□□ 0.24
TRAV3A0A0B4J244 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
TRAV3A0A0B4J244 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV3A0A0B4J244 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV3A0A0B4J244 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV3A0A0B4J244 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
TRAV3A0A0B4J244 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
TRAV3A0A0B4J244 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV3A0A0B4J244 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV3A0A0B4J244 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
TRAV3A0A0B4J244 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.52■□□□□ 0.23
TRAV3A0A0B4J244 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV3A0A0B4J244 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TRAV3A0A0B4J244 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TRAV3A0A0B4J244 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV3A0A0B4J244 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV3A0A0B4J244 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV3A0A0B4J244 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV3A0A0B4J244 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV3A0A0B4J244 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV3A0A0B4J244 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV3A0A0B4J244 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV3A0A0B4J244 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRAV3A0A0B4J244 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TRAV3A0A0B4J244 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms