Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV13-1A0A0B4J241 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV13-1A0A0B4J241 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV13-1A0A0B4J241 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV13-1A0A0B4J241 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV13-1A0A0B4J241 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV13-1A0A0B4J241 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV13-1A0A0B4J241 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV13-1A0A0B4J241 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV13-1A0A0B4J241 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV13-1A0A0B4J241 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV13-1A0A0B4J241 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV13-1A0A0B4J241 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TRAV13-1A0A0B4J241 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TRAV13-1A0A0B4J241 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV13-1A0A0B4J241 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV13-1A0A0B4J241 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV13-1A0A0B4J241 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV13-1A0A0B4J241 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV13-1A0A0B4J241 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV13-1A0A0B4J241 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV13-1A0A0B4J241 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
TRAV13-1A0A0B4J241 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
TRAV13-1A0A0B4J241 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV13-1A0A0B4J241 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV13-1A0A0B4J241 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV13-1A0A0B4J241 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV13-1A0A0B4J241 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV13-1A0A0B4J241 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV13-1A0A0B4J241 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC14.3□□□□□ -0.12
TRAV13-1A0A0B4J241 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV13-1A0A0B4J241 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV13-1A0A0B4J241 TRIR-202ENST00000588213 841 ntTSL 3 BASIC14.3□□□□□ -0.12
TRAV13-1A0A0B4J241 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
TRAV13-1A0A0B4J241 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV13-1A0A0B4J241 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV13-1A0A0B4J241 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV13-1A0A0B4J241 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV13-1A0A0B4J241 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
TRAV13-1A0A0B4J241 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV13-1A0A0B4J241 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
TRAV13-1A0A0B4J241 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV13-1A0A0B4J241 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV13-1A0A0B4J241 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
TRAV13-1A0A0B4J241 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV13-1A0A0B4J241 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TRAV13-1A0A0B4J241 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV13-1A0A0B4J241 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV13-1A0A0B4J241 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV13-1A0A0B4J241 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRAV13-1A0A0B4J241 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV13-1A0A0B4J241 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV13-1A0A0B4J241 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV13-1A0A0B4J241 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV13-1A0A0B4J241 RPP21-222ENST00000433076 577 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV13-1A0A0B4J241 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC14.29□□□□□ -0.12
TRAV13-1A0A0B4J241 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV13-1A0A0B4J241 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV13-1A0A0B4J241 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV13-1A0A0B4J241 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAV13-1A0A0B4J241 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV13-1A0A0B4J241 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV13-1A0A0B4J241 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
TRAV13-1A0A0B4J241 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
TRAV13-1A0A0B4J241 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRAV13-1A0A0B4J241 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV13-1A0A0B4J241 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV13-1A0A0B4J241 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
TRAV13-1A0A0B4J241 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV13-1A0A0B4J241 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV13-1A0A0B4J241 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAV13-1A0A0B4J241 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRAV13-1A0A0B4J241 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV13-1A0A0B4J241 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV13-1A0A0B4J241 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV13-1A0A0B4J241 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV13-1A0A0B4J241 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV13-1A0A0B4J241 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV13-1A0A0B4J241 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV13-1A0A0B4J241 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV13-1A0A0B4J241 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV13-1A0A0B4J241 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV13-1A0A0B4J241 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV13-1A0A0B4J241 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC14.28□□□□□ -0.12
TRAV13-1A0A0B4J241 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV13-1A0A0B4J241 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
TRAV13-1A0A0B4J241 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC14.28□□□□□ -0.12
TRAV13-1A0A0B4J241 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC14.28□□□□□ -0.12
TRAV13-1A0A0B4J241 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
TRAV13-1A0A0B4J241 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC14.28□□□□□ -0.12
TRAV13-1A0A0B4J241 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV13-1A0A0B4J241 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV13-1A0A0B4J241 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC14.28□□□□□ -0.12
TRAV13-1A0A0B4J241 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV13-1A0A0B4J241 TRIR-205ENST00000592273 783 ntTSL 3 BASIC14.28□□□□□ -0.12
TRAV13-1A0A0B4J241 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
TRAV13-1A0A0B4J241 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV13-1A0A0B4J241 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TRAV13-1A0A0B4J241 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV13-1A0A0B4J241 AC120498.9-201ENST00000339021 3867 ntBASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms