Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 LAIR2-202ENST00000351841 538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 RN7SKP75-201ENST00000363070 296 ntBASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 PPIH-203ENST00000372550 665 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 MAS1L-201ENST00000377127 1260 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 TRBV27-201ENST00000390399 387 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 MORN2-202ENST00000409077 465 ntTSL 5 BASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 UQCRHP2-201ENST00000415651 288 ntBASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 AC007036.2-201ENST00000415934 437 ntTSL 3 BASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 HSD3BP5-201ENST00000434856 1132 ntBASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 AC093582.1-201ENST00000447086 385 ntBASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 AC004918.1-201ENST00000467537 770 ntTSL 2 BASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 RN7SL239P-201ENST00000490061 300 ntBASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 HOXB-AS1-203ENST00000504972 680 ntTSL 3 BASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 AC068205.1-201ENST00000526615 689 ntTSL 3 BASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 AC134684.1-201ENST00000533883 264 ntBASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 AC117503.2-201ENST00000538837 321 ntTSL 3 BASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 PRR13-210ENST00000551003 1009 ntAPPRIS ALT2 TSL 3 BASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 NIFKP4-201ENST00000567275 1192 ntBASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 RN7SL387P-201ENST00000581015 273 ntBASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 AP006565.1-201ENST00000581117 586 ntTSL 2 BASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 AC211469.1-201ENST00000604263 394 ntBASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 AC073657.1-201ENST00000607504 316 ntTSL 3 BASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 AC009122.1-201ENST00000640559 1218 ntAPPRIS P1 TSL 3 BASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 LRRC37BP1-203ENST00000417404 4742 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 LARP7-201ENST00000324052 2164 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 OR3A1-201ENST00000323404 1650 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 RAF1P1-201ENST00000508566 1696 ntBASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 SLU7-201ENST00000297151 3793 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 PAMR1-207ENST00000619888 3142 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 RHOBTB2-205ENST00000519685 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 XPNPEP2-202ENST00000371106 3270 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 NET1-202ENST00000380359 3253 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 PSG11-202ENST00000320078 1575 ntAPPRIS P2 TSL 2 BASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 HPS5-203ENST00000396253 4725 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 FAAH2-201ENST00000374900 1983 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 HIPK1-206ENST00000369559 3424 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 NLRP12-204ENST00000391773 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 C14orf159-211ENST00000518868 3075 ntAPPRIS ALT1 TSL 2 BASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 VSIG4-202ENST00000412866 1474 ntTSL 2 BASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 PEX2-204ENST00000520103 1470 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
SYCE2Q6PIF2 ADGRG6-203ENST00000367608 6879 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 HIF1A-202ENST00000337138 3919 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 HIF1A-203ENST00000394997 3922 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 BCOR-201ENST00000342274 6390 ntAPPRIS P3 TSL 5 BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 A4GNT-201ENST00000236709 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 LILRB1-204ENST00000396327 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 CARD8-203ENST00000447740 5210 ntAPPRIS P3 TSL 2 BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 CRISP2-202ENST00000616725 1376 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 ZNF185-211ENST00000535861 4421 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 LINC01411-203ENST00000507361 2098 ntTSL 3 BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 MYOF-204ENST00000371489 1519 ntTSL 2 BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 PSMA5-206ENST00000538610 1504 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 SRGAP2-217ENST00000624873 4705 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 CDK5RAP2-203ENST00000360822 5551 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 GABRB3-201ENST00000299267 4494 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 FAM71B-201ENST00000302938 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 ZNF469-201ENST00000437464 13203 ntAPPRIS P2 TSL 5 BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 SMAD9-203ENST00000399275 5389 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 FUT10-201ENST00000327671 3825 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 SNORA68B-201ENST00000364518 133 ntBASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 AC009967.1-201ENST00000379462 793 ntBASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 AC007036.1-201ENST00000430537 674 ntTSL 3 BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 AC136896.1-201ENST00000438334 547 ntBASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 AL109945.1-201ENST00000448134 687 ntTSL 2 BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 AL662789.1-201ENST00000448198 724 ntTSL 2 BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 LDHAP3-201ENST00000448312 1008 ntBASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 AC073465.3-201ENST00000448468 405 ntBASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 GAPDHP47-201ENST00000489113 999 ntBASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 AC136628.1-201ENST00000503218 561 ntTSL 4 BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 CFL1P5-201ENST00000508046 502 ntBASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 NBPF22P-201ENST00000508988 1143 ntBASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 TPT1-AS1-218ENST00000523445 856 ntTSL 5 BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 PGA3-204ENST00000538258 867 ntTSL 2 BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 FLVCR2-202ENST00000539311 1221 ntTSL 2 BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 PGA3-207ENST00000543125 968 ntTSL 2 BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 PGA4-206ENST00000544899 867 ntTSL 2 BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 AC089998.4-201ENST00000552532 459 ntTSL 3 BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 RNASE1-205ENST00000555698 655 ntTSL 3 BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 AC008649.2-201ENST00000585999 242 ntTSL 5 BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 AC036176.2-201ENST00000589763 1153 ntBASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 AC005180.1-201ENST00000591137 587 ntTSL 4 BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 AL161725.1-211ENST00000592805 889 ntTSL 5 BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 HINT1P2-201ENST00000604731 235 ntBASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 AC009237.16-201ENST00000612987 506 ntBASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 AL139093.1-201ENST00000622029 1014 ntBASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 AQP4-AS1-206ENST00000628174 919 ntTSL 5 BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 SPOCD1-202ENST00000360482 3960 ntAPPRIS P3 TSL 2 BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 MTMR4-201ENST00000323456 5839 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 SPDYE3-201ENST00000332397 3185 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 FP325330.3-201ENST00000623760 9537 ntBASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 CPA6-201ENST00000297770 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 FAM239B-202ENST00000424415 2194 ntTSL 2 BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 HPS5-206ENST00000531848 2160 ntTSL 5 BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 DEPDC5-201ENST00000382111 5212 ntTSL 5 BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 GANAB-201ENST00000346178 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 NBPF4-201ENST00000415641 2485 ntAPPRIS P2 TSL 2 BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 RUNX1T1-204ENST00000422361 2450 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 PSMA3-AS1-204ENST00000554360 2475 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 AP001107.1-201ENST00000501708 2792 ntTSL 2 BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 DIAPH1-211ENST00000518047 4668 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms