Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 RPSAP74-201ENST00000522047 393 ntBASIC9.99□□□□□ -0.81
LMO3Q8TAP4 INTS4-205ENST00000527522 956 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
LMO3Q8TAP4 AC103855.2-202ENST00000527642 568 ntTSL 4 BASIC9.99□□□□□ -0.81
LMO3Q8TAP4 TMEM126A-206ENST00000532180 643 ntTSL 3 BASIC9.99□□□□□ -0.81
LMO3Q8TAP4 AC078776.1-201ENST00000546558 562 ntTSL 4 BASIC9.99□□□□□ -0.81
LMO3Q8TAP4 AC087798.1-201ENST00000547882 534 ntTSL 5 BASIC9.99□□□□□ -0.81
LMO3Q8TAP4 AL162311.2-201ENST00000550416 709 ntBASIC9.99□□□□□ -0.81
LMO3Q8TAP4 PCSK6-AS1-201ENST00000558696 639 ntTSL 3 BASIC9.99□□□□□ -0.81
LMO3Q8TAP4 AC126335.1-201ENST00000568414 510 ntTSL 2 BASIC9.99□□□□□ -0.81
LMO3Q8TAP4 MED31-203ENST00000575197 593 ntTSL 2 BASIC9.99□□□□□ -0.81
LMO3Q8TAP4 FAM222B-214ENST00000583953 564 ntTSL 4 BASIC9.99□□□□□ -0.81
LMO3Q8TAP4 HMGN1P31-201ENST00000590085 304 ntBASIC9.99□□□□□ -0.81
LMO3Q8TAP4 AFMID-214ENST00000591952 582 ntTSL 2 BASIC9.99□□□□□ -0.81
LMO3Q8TAP4 AC008870.5-201ENST00000624143 650 ntBASIC9.99□□□□□ -0.81
LMO3Q8TAP4 FAM166B-207ENST00000639789 651 ntTSL 2 BASIC9.99□□□□□ -0.81
LMO3Q8TAP4 NHLRC3-203ENST00000470258 3298 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
LMO3Q8TAP4 HSPA8P16-201ENST00000454171 1865 ntBASIC9.99□□□□□ -0.81
LMO3Q8TAP4 HKR1-213ENST00000589392 2152 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
LMO3Q8TAP4 PTGS1-205ENST00000540753 5375 ntTSL 2 BASIC9.99□□□□□ -0.81
LMO3Q8TAP4 TRPC3-201ENST00000264811 3675 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
LMO3Q8TAP4 CICP22-201ENST00000432801 1319 ntBASIC9.99□□□□□ -0.81
LMO3Q8TAP4 CNTN4-205ENST00000427331 4980 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
LMO3Q8TAP4 ZNF30-206ENST00000601957 2583 ntTSL 2 BASIC9.99□□□□□ -0.81
LMO3Q8TAP4 FO393415.1-201ENST00000314481 2255 ntTSL 2 BASIC9.99□□□□□ -0.81
LMO3Q8TAP4 AL353588.1-201ENST00000505802 3513 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
LMO3Q8TAP4 OSBPL3-202ENST00000396429 2707 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 NLRP1-217ENST00000619223 4698 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 AC011195.2-201ENST00000583666 1486 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 CREB1-206ENST00000432329 7650 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 CCDC85C-201ENST00000380243 16393 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 CACNA1E-206ENST00000367573 7067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 SLC7A7-215ENST00000555702 2272 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 AC104574.2-201ENST00000559783 1985 ntTSL 3 BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 TCTN3-207ENST00000614499 2739 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 PABPC1L-203ENST00000217075 670 ntTSL 5 BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 LRRC4-201ENST00000249363 3828 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 MIR629-201ENST00000385230 97 ntBASIC9.98□□□□□ -0.81
LMO3Q8TAP4 SMIM26-201ENST00000411646 505 ntAPPRIS P5 TSL 1 (best) BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 SCG5-202ENST00000413748 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 PMP22-204ENST00000426385 571 ntTSL 2 BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 LINC01280-201ENST00000449783 1184 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 DEFT1P2-201ENST00000453669 421 ntBASIC9.98□□□□□ -0.81
LMO3Q8TAP4 AC025572.1-201ENST00000472243 553 ntTSL 4 BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 TMEM92-AS1-201ENST00000508851 750 ntTSL 3 BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 GABRB3-205ENST00000545868 1267 ntTSL 5 BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 AC079789.1-201ENST00000561655 885 ntBASIC9.98□□□□□ -0.81
LMO3Q8TAP4 FRG2DP-201ENST00000564452 852 ntTSL 2 BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 UBBP4-201ENST00000583708 689 ntBASIC9.98□□□□□ -0.81
LMO3Q8TAP4 RPL7AP66-201ENST00000588490 801 ntBASIC9.98□□□□□ -0.81
LMO3Q8TAP4 AC005050.1-201ENST00000591803 550 ntTSL 4 BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 ZNF415-209ENST00000595813 580 ntTSL 4 BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 AC020908.3-201ENST00000597045 610 ntTSL 3 BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 AC025278.2-201ENST00000598153 1063 ntBASIC9.98□□□□□ -0.81
LMO3Q8TAP4 AC055822.1-201ENST00000606067 445 ntBASIC9.98□□□□□ -0.81
LMO3Q8TAP4 GOLGA6L17P-201ENST00000611297 586 ntTSL 4 BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 PPARGC1A-216ENST00000612355 936 ntTSL 5 BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 MIR8078-201ENST00000619811 84 ntBASIC9.98□□□□□ -0.81
LMO3Q8TAP4 AC004241.4-201ENST00000622792 1120 ntBASIC9.98□□□□□ -0.81
LMO3Q8TAP4 MIR6880-201ENST00000622851 62 ntBASIC9.98□□□□□ -0.81
LMO3Q8TAP4 LINC01940-201ENST00000455228 3489 ntTSL 2 BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 TCF4-205ENST00000537578 2767 ntTSL 2 BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 PLEC-203ENST00000354589 14736 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 CCDC15-203ENST00000529051 3924 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 BUB1-212ENST00000535254 3576 ntTSL 2 BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 CACNA1E-203ENST00000360108 6970 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 MAP3K7CL-202ENST00000339024 2066 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 MAP3K7CL-208ENST00000399935 2093 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 PART1-202ENST00000506884 2068 ntTSL 2 BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 ZNF322-207ENST00000607204 4737 ntAPPRIS P1 TSL 4 BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 KIAA0319-202ENST00000430948 6620 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 LINC01304-204ENST00000454455 2454 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 ITGB6-211ENST00000620391 4401 ntTSL 3 BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 COL25A1-209ENST00000622134 4819 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 EFHC1-226ENST00000636954 2129 ntTSL 2 BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 EFHC1-213ENST00000635996 2548 ntTSL 5 BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 VWA3B-213ENST00000477737 4454 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 EEF1A1P19-201ENST00000513637 1382 ntBASIC9.98□□□□□ -0.81
LMO3Q8TAP4 SORD-201ENST00000267814 4909 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 KCNMA1-AS1-206ENST00000600782 1755 ntTSL 5 BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 OSBPL3-204ENST00000409069 2614 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 NPY5R-201ENST00000338566 1843 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 UCA1-201ENST00000397381 2299 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 ASCC3-204ENST00000369162 8146 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 HACL1-208ENST00000456194 1880 ntTSL 2 BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 AGBL4-202ENST00000371836 1454 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 ABCC5-201ENST00000265586 5712 ntTSL 5 BASIC9.98□□□□□ -0.81
LMO3Q8TAP4 ARHGAP25-209ENST00000479844 1933 ntTSL 5 BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 SGK1-201ENST00000237305 2401 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 SIN3A-201ENST00000360439 5050 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 GLE1-201ENST00000309971 3321 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 METTL7A-201ENST00000332160 3390 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 KCNMA1-228ENST00000638223 4340 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 NELL1-203ENST00000357134 3022 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 ABI1-205ENST00000376139 3516 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 DSTYK-202ENST00000367162 7874 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 TRPM1-201ENST00000256552 5514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 LIMCH1-215ENST00000512632 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 TNFRSF19-201ENST00000248484 3276 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 ANO4-207ENST00000550015 2293 ntTSL 2 BASIC9.97□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms