RNA–Protein interactions for RNA: ENST00000357134.9

NELL1-203, Transcript of neural EGFL like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NELL1, Length 3,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELL1-203ENST00000357134 NISCHQ9Y2I1 1504 aa18.19■□□□□ 0.5
NELL1-203ENST00000357134 SHROOM4Q9ULL8 1493 aa16.37■□□□□ 0.21
NELL1-203ENST00000357134 SUPT5HO00267 1087 aaKnown RBP16.18■□□□□ 0.18
NELL1-203ENST00000357134 DCAF8L2P0C7V8 631 aa15.8■□□□□ 0.12
NELL1-203ENST00000357134 MYO15BQ96JP2 1530 aa15.6■□□□□ 0.09
NELL1-203ENST00000357134 PCGF6Q9BYE7 350 aa15.6■□□□□ 0.09
NELL1-203ENST00000357134 CHIC1Q5VXU3 224 aa15.58■□□□□ 0.09
NELL1-203ENST00000357134 PPARGC1BQ86YN6 1023 aaKnown RBP15.54■□□□□ 0.08
NELL1-203ENST00000357134 HRCP23327 699 aa15.52■□□□□ 0.07
NELL1-203ENST00000357134 LOC105371045A0A1W2PR82 267 aa15.41■□□□□ 0.06
NELL1-203ENST00000357134 ZCCHC6Q5VYS8 1495 aaKnown RBP15.37■□□□□ 0.05
NELL1-203ENST00000357134 EHMT2Q96KQ7 1210 aa15.18■□□□□ 0.02
NELL1-203ENST00000357134 CCDC180Q9P1Z9 1646 aa15.15■□□□□ 0.02
NELL1-203ENST00000357134 FAM9AQ8IZU1 332 aaPredicted RBP15.05■□□□□ 0
NELL1-203ENST00000357134 TRIM26Q12899 539 aaPredicted RBP14.93□□□□□ -0.02
NELL1-203ENST00000357134 DCAF1Q9Y4B6 1507 aa14.88□□□□□ -0.03
NELL1-203ENST00000357134 TRIM41Q8WV44 630 aa14.83□□□□□ -0.04
NELL1-203ENST00000357134 TTBK1Q5TCY1 1321 aaPredicted RBP14.69□□□□□ -0.06
NELL1-203ENST00000357134 RSF1Q96T23 1441 aaPredicted RBP14.64□□□□□ -0.07
NELL1-203ENST00000357134 SCRIBQ14160 1630 aa14.62□□□□□ -0.07
NELL1-203ENST00000357134 SCAF1Q9H7N4 1312 aaKnown RBP14.62□□□□□ -0.07
NELL1-203ENST00000357134 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.6□□□□□ -0.07
NELL1-203ENST00000357134 RB1CC1Q8TDY2 1594 aa14.55□□□□□ -0.08
NELL1-203ENST00000357134 ZEB1P37275 1124 aaPredicted RBP14.54□□□□□ -0.08
NELL1-203ENST00000357134 ABCC9O60706 1549 aa14.52□□□□□ -0.09
NELL1-203ENST00000357134 CCER1Q8TC90 406 aaPredicted RBP14.46□□□□□ -0.09
NELL1-203ENST00000357134 CECR2Q9BXF3 1484 aa14.44□□□□□ -0.1
NELL1-203ENST00000357134 NEUROD1Q13562 356 aa14.37□□□□□ -0.11
NELL1-203ENST00000357134 MROH2BQ7Z745 1585 aa14.31□□□□□ -0.12
NELL1-203ENST00000357134 DIEXFQ68CQ4 756 aaKnown RBP14.26□□□□□ -0.13
NELL1-203ENST00000357134 ACIN1Q9UKV3 1341 aaKnown RBP14.26□□□□□ -0.13
NELL1-203ENST00000357134 GTF3C3Q9Y5Q9 886 aa14.25□□□□□ -0.13
NELL1-203ENST00000357134 WIZO95785 1651 aa14.25□□□□□ -0.13
NELL1-203ENST00000357134 YTHDC1Q96MU7 727 aaKnown RBP14.23□□□□□ -0.13
NELL1-203ENST00000357134 PELP1Q8IZL8 1130 aaKnown RBP14.22□□□□□ -0.13
NELL1-203ENST00000357134 RANGAP1P46060 587 aaPredicted RBP14.18□□□□□ -0.14
NELL1-203ENST00000357134 UBTFP17480 764 aaKnown RBP14.17□□□□□ -0.14
NELL1-203ENST00000357134 ABCC8Q09428 1581 aa14.15□□□□□ -0.14
NELL1-203ENST00000357134 HNRNPUL2Q1KMD3 747 aaKnown RBP14.13□□□□□ -0.15
NELL1-203ENST00000357134 NACADO15069 1562 aa14.12□□□□□ -0.15
NELL1-203ENST00000357134 CCDC88BA6NC98 1476 aa14.12□□□□□ -0.15
NELL1-203ENST00000357134 SOGA1O94964 1423 aa14.1□□□□□ -0.15
NELL1-203ENST00000357134 RUSC2Q8N2Y8 1516 aa14.06□□□□□ -0.16
NELL1-203ENST00000357134 CENPBP07199 599 aaPredicted RBP14.06□□□□□ -0.16
NELL1-203ENST00000357134 CEP162Q5TB80 1403 aa14.05□□□□□ -0.16
NELL1-203ENST00000357134 PABPN1Q86U42 306 aaKnown RBP eCLIP14.01□□□□□ -0.17
NELL1-203ENST00000357134 CSRNP3Q8WYN3 585 aa14.01□□□□□ -0.17
NELL1-203ENST00000357134 MIER1Q8N108 512 aa14□□□□□ -0.17
NELL1-203ENST00000357134 ZNF316A6NFI3 1004 aaPredicted RBP13.99□□□□□ -0.17
NELL1-203ENST00000357134 BAZ1AQ9NRL2 1556 aaPredicted RBP13.93□□□□□ -0.18
NELL1-203ENST00000357134 EIF4G1Q04637 1599 aaKnown RBP13.89□□□□□ -0.19
NELL1-203ENST00000357134 TNIKQ9UKE5 1360 aa13.89□□□□□ -0.19
NELL1-203ENST00000357134 WRNQ14191 1432 aaPredicted RBP eCLIP13.86□□□□□ -0.19
NELL1-203ENST00000357134 SMARCA2P51531 1590 aa13.83□□□□□ -0.2
NELL1-203ENST00000357134 TOP2AP11388 1531 aaKnown RBP13.81□□□□□ -0.2
NELL1-203ENST00000357134 APLP2Q06481 763 aa13.8□□□□□ -0.2
NELL1-203ENST00000357134 MYT1Q01538 1121 aa13.8□□□□□ -0.2
NELL1-203ENST00000357134 SMARCA4P51532 1647 aa13.77□□□□□ -0.21
NELL1-203ENST00000357134 UNC13AQ9UPW8 1703 aa13.75□□□□□ -0.21
NELL1-203ENST00000357134 ITGAEP38570 1179 aa13.75□□□□□ -0.21
NELL1-203ENST00000357134 GOLGA3Q08378 1498 aa13.75□□□□□ -0.21
NELL1-203ENST00000357134 CLIP1P30622 1438 aa13.73□□□□□ -0.21
NELL1-203ENST00000357134 KANK4Q5T7N3 995 aaPredicted RBP13.67□□□□□ -0.22
NELL1-203ENST00000357134 RAPGEF2Q9Y4G8 1499 aa13.67□□□□□ -0.22
NELL1-203ENST00000357134 EEA1Q15075 1411 aa13.64□□□□□ -0.23
NELL1-203ENST00000357134 KCNH8Q96L42 1107 aa13.64□□□□□ -0.23
NELL1-203ENST00000357134 SYNJ1O43426 1573 aa13.64□□□□□ -0.23
NELL1-203ENST00000357134 BICRAQ9NZM4 1560 aa13.64□□□□□ -0.23
NELL1-203ENST00000357134 CEP164Q9UPV0 1460 aa13.61□□□□□ -0.23
NELL1-203ENST00000357134 VPS8Q8N3P4 1428 aa13.6□□□□□ -0.23
NELL1-203ENST00000357134 BCANQ96GW7 911 aa13.58□□□□□ -0.24
NELL1-203ENST00000357134 SUPT16HQ9Y5B9 1047 aaKnown RBP13.56□□□□□ -0.24
NELL1-203ENST00000357134 DHX57Q6P158 1386 aaKnown RBP13.55□□□□□ -0.24
NELL1-203ENST00000357134 HIRIP3Q9BW71 556 aaPredicted RBP13.54□□□□□ -0.24
NELL1-203ENST00000357134 KIF21BO75037 1637 aa13.53□□□□□ -0.24
NELL1-203ENST00000357134 ATP1B4Q9UN42 357 aaPredicted RBP13.48□□□□□ -0.25
NELL1-203ENST00000357134 P3H3Q8IVL6 736 aa13.45□□□□□ -0.26
NELL1-203ENST00000357134 SIN3AQ96ST3 1273 aa13.45□□□□□ -0.26
NELL1-203ENST00000357134 DDX10Q13206 875 aaKnown RBP13.45□□□□□ -0.26
NELL1-203ENST00000357134 BAZ1BQ9UIG0 1483 aaKnown RBP13.45□□□□□ -0.26
NELL1-203ENST00000357134 ATAD2BQ9ULI0 1458 aa13.44□□□□□ -0.26
NELL1-203ENST00000357134 TSHZ2Q9NRE2 1034 aa13.42□□□□□ -0.26
NELL1-203ENST00000357134 ARAP1Q96P48 1450 aa13.42□□□□□ -0.26
NELL1-203ENST00000357134 FAM50AQ14320 339 aaKnown RBP13.4□□□□□ -0.26
NELL1-203ENST00000357134 FKBP8Q14318 412 aa13.37□□□□□ -0.27
NELL1-203ENST00000357134 TRIM52Q96A61 297 aa13.37□□□□□ -0.27
NELL1-203ENST00000357134 CCNB3Q8WWL7 1395 aa13.34□□□□□ -0.27
NELL1-203ENST00000357134 RAB3GAP2Q9H2M9 1393 aa13.34□□□□□ -0.27
NELL1-203ENST00000357134 CLSPNQ9HAW4 1339 aa13.31□□□□□ -0.28
NELL1-203ENST00000357134 PRXQ9BXM0 1461 aa13.31□□□□□ -0.28
NELL1-203ENST00000357134 TOP2BQ02880 1626 aa13.29□□□□□ -0.28
NELL1-203ENST00000357134 PEG3Q9GZU2 1588 aa13.28□□□□□ -0.28
NELL1-203ENST00000357134 ARHGAP35Q9NRY4 1499 aa13.27□□□□□ -0.29
NELL1-203ENST00000357134 RRBP1Q9P2E9 1410 aaKnown RBP13.26□□□□□ -0.29
NELL1-203ENST00000357134 CUX1P39880 1505 aa13.25□□□□□ -0.29
NELL1-203ENST00000357134 IRX6P78412 446 aaPredicted RBP13.25□□□□□ -0.29
NELL1-203ENST00000357134 KIF27Q86VH2 1401 aa13.24□□□□□ -0.29
NELL1-203ENST00000357134 PHLDB1Q86UU1 1377 aa13.22□□□□□ -0.29
NELL1-203ENST00000357134 WDR97A6NE52 1622 aa13.22□□□□□ -0.29
NELL1-203ENST00000357134 MAPKBP1O60336 1514 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms