RNA–Protein interactions for RNA: ENST00000367573.6

CACNA1E-206, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1E, Length 7,067 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-206ENST00000367573 DCAF8L2P0C7V8 631 aa19.33■□□□□ 0.69
CACNA1E-206ENST00000367573 SUPT5HO00267 1087 aaKnown RBP17.68■□□□□ 0.42
CACNA1E-206ENST00000367573 EHMT2Q96KQ7 1210 aa17.67■□□□□ 0.42
CACNA1E-206ENST00000367573 SHROOM4Q9ULL8 1493 aa17.42■□□□□ 0.38
CACNA1E-206ENST00000367573 FAM9AQ8IZU1 332 aaPredicted RBP17.21■□□□□ 0.35
CACNA1E-206ENST00000367573 APLP2Q06481 763 aa17.11■□□□□ 0.33
CACNA1E-206ENST00000367573 RANGAP1P46060 587 aaPredicted RBP16.97■□□□□ 0.31
CACNA1E-206ENST00000367573 TTBK1Q5TCY1 1321 aaPredicted RBP16.97■□□□□ 0.31
CACNA1E-206ENST00000367573 NISCHQ9Y2I1 1504 aa16.92■□□□□ 0.3
CACNA1E-206ENST00000367573 ATP1B4Q9UN42 357 aaPredicted RBP16.9■□□□□ 0.3
CACNA1E-206ENST00000367573 PELP1Q8IZL8 1130 aaKnown RBP16.65■□□□□ 0.26
CACNA1E-206ENST00000367573 MYT1LQ9UL68 1186 aa16.55■□□□□ 0.24
CACNA1E-206ENST00000367573 PCGF6Q9BYE7 350 aa16.37■□□□□ 0.21
CACNA1E-206ENST00000367573 CHIC1Q5VXU3 224 aa16.37■□□□□ 0.21
CACNA1E-206ENST00000367573 UBTFP17480 764 aaKnown RBP16.35■□□□□ 0.21
CACNA1E-206ENST00000367573 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.31■□□□□ 0.2
CACNA1E-206ENST00000367573 HNRNPUL2Q1KMD3 747 aaKnown RBP16.31■□□□□ 0.2
CACNA1E-206ENST00000367573 TRIM41Q8WV44 630 aa16.27■□□□□ 0.2
CACNA1E-206ENST00000367573 ERICH6Q7L0X2 663 aa16.17■□□□□ 0.18
CACNA1E-206ENST00000367573 CCER1Q8TC90 406 aaPredicted RBP16.13■□□□□ 0.17
CACNA1E-206ENST00000367573 POLR3GLQ9BT43 218 aa16.09■□□□□ 0.17
CACNA1E-206ENST00000367573 SLC4A1APQ9BWU0 796 aaKnown RBP16.03■□□□□ 0.16
CACNA1E-206ENST00000367573 PPARGC1BQ86YN6 1023 aaKnown RBP16.01■□□□□ 0.15
CACNA1E-206ENST00000367573 ITGAEP38570 1179 aa16■□□□□ 0.15
CACNA1E-206ENST00000367573 CNGB1Q14028 1251 aaPredicted RBP15.96■□□□□ 0.15
CACNA1E-206ENST00000367573 YTHDC1Q96MU7 727 aaKnown RBP15.86■□□□□ 0.13
CACNA1E-206ENST00000367573 NEFLP07196 543 aa15.85■□□□□ 0.13
CACNA1E-206ENST00000367573 CENPBP07199 599 aaPredicted RBP15.81■□□□□ 0.12
CACNA1E-206ENST00000367573 FBLN2P98095 1184 aa15.72■□□□□ 0.11
CACNA1E-206ENST00000367573 PABPN1Q86U42 306 aaKnown RBP eCLIP15.68■□□□□ 0.1
CACNA1E-206ENST00000367573 ZEB1P37275 1124 aaPredicted RBP15.66■□□□□ 0.1
CACNA1E-206ENST00000367573 BCANQ96GW7 911 aa15.64■□□□□ 0.09
CACNA1E-206ENST00000367573 DAXXQ9UER7 740 aaPredicted RBP15.63■□□□□ 0.09
CACNA1E-206ENST00000367573 PLPPR3Q6T4P5 718 aa15.6■□□□□ 0.09
CACNA1E-206ENST00000367573 SLC24A1O60721 1099 aa15.6■□□□□ 0.09
CACNA1E-206ENST00000367573 ABCC9O60706 1549 aa15.52■□□□□ 0.08
CACNA1E-206ENST00000367573 FAM50AQ14320 339 aaKnown RBP15.49■□□□□ 0.07
CACNA1E-206ENST00000367573 TRIM52Q96A61 297 aa15.48■□□□□ 0.07
CACNA1E-206ENST00000367573 MYT1Q01538 1121 aa15.42■□□□□ 0.06
CACNA1E-206ENST00000367573 CLSPNQ9HAW4 1339 aa15.41■□□□□ 0.06
CACNA1E-206ENST00000367573 BCL11AQ9H165 835 aa15.4■□□□□ 0.06
CACNA1E-206ENST00000367573 ARID3CA6NKF2 412 aa15.39■□□□□ 0.05
CACNA1E-206ENST00000367573 ZNF326Q5BKZ1 582 aaKnown RBP15.38■□□□□ 0.05
CACNA1E-206ENST00000367573 ESF1Q9H501 851 aaKnown RBP15.36■□□□□ 0.05
CACNA1E-206ENST00000367573 LOC105371045A0A1W2PR82 267 aa15.29■□□□□ 0.04
CACNA1E-206ENST00000367573 NEUROD1Q13562 356 aa15.28■□□□□ 0.04
CACNA1E-206ENST00000367573 ZBTB47Q9UFB7 747 aaPredicted RBP15.24■□□□□ 0.03
CACNA1E-206ENST00000367573 TRIM26Q12899 539 aaPredicted RBP15.23■□□□□ 0.03
CACNA1E-206ENST00000367573 ZNF316A6NFI3 1004 aaPredicted RBP15.22■□□□□ 0.03
CACNA1E-206ENST00000367573 STAG3Q9UJ98 1225 aa15.21■□□□□ 0.03
CACNA1E-206ENST00000367573 ZNF777Q9ULD5 760 aaPredicted RBP15.2■□□□□ 0.02
CACNA1E-206ENST00000367573 P3H3Q8IVL6 736 aa15.2■□□□□ 0.02
CACNA1E-206ENST00000367573 CHGAP10645 457 aaKnown RBP15.15■□□□□ 0.02
CACNA1E-206ENST00000367573 NPM1P06748 294 aaKnown RBP eCLIP15.14■□□□□ 0.01
CACNA1E-206ENST00000367573 NEFMP07197 916 aa15.14■□□□□ 0.01
CACNA1E-206ENST00000367573 SCAF1Q9H7N4 1312 aaKnown RBP15.14■□□□□ 0.01
CACNA1E-206ENST00000367573 A0A0G2JS52 829 aa15.12■□□□□ 0.01
CACNA1E-206ENST00000367573 CANXP27824 592 aaKnown RBP15.08■□□□□ 0
CACNA1E-206ENST00000367573 PLEKHG5O94827 1062 aa15.05■□□□□ -0
CACNA1E-206ENST00000367573 SENP3Q9H4L4 574 aaPredicted RBP14.97□□□□□ -0.01
CACNA1E-206ENST00000367573 HRCP23327 699 aa14.96□□□□□ -0.01
CACNA1E-206ENST00000367573 ZBTB7CA1YPR0 619 aa14.92□□□□□ -0.02
CACNA1E-206ENST00000367573 RTL5Q5HYW3 569 aaPredicted RBP14.9□□□□□ -0.02
CACNA1E-206ENST00000367573 CDK11AQ9UQ88 783 aaPredicted RBP14.89□□□□□ -0.03
CACNA1E-206ENST00000367573 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.88□□□□□ -0.03
CACNA1E-206ENST00000367573 ANP32CO43423 234 aa14.87□□□□□ -0.03
CACNA1E-206ENST00000367573 C14orf37Q86TY3 774 aa14.85□□□□□ -0.03
CACNA1E-206ENST00000367573 ARID4BQ4LE39 1312 aaPredicted RBP14.81□□□□□ -0.04
CACNA1E-206ENST00000367573 DIEXFQ68CQ4 756 aaKnown RBP14.79□□□□□ -0.04
CACNA1E-206ENST00000367573 HAP1P54257 671 aaPredicted RBP14.79□□□□□ -0.04
CACNA1E-206ENST00000367573 NPM2Q86SE8 214 aaKnown RBP14.74□□□□□ -0.05
CACNA1E-206ENST00000367573 CHMP7Q8WUX9 453 aaPredicted RBP14.74□□□□□ -0.05
CACNA1E-206ENST00000367573 TRHP20396 242 aaPredicted RBP14.73□□□□□ -0.05
CACNA1E-206ENST00000367573 KCNH8Q96L42 1107 aa14.7□□□□□ -0.06
CACNA1E-206ENST00000367573 PPP1R15AO75807 674 aaPredicted RBP14.7□□□□□ -0.06
CACNA1E-206ENST00000367573 ARXQ96QS3 562 aa14.67□□□□□ -0.06
CACNA1E-206ENST00000367573 CHIC2Q9UKJ5 165 aa14.67□□□□□ -0.06
CACNA1E-206ENST00000367573 SALL2Q9Y467 1007 aaPredicted RBP14.65□□□□□ -0.06
CACNA1E-206ENST00000367573 KDM2AQ9Y2K7 1162 aa14.63□□□□□ -0.07
CACNA1E-206ENST00000367573 SCRIBQ14160 1630 aa14.61□□□□□ -0.07
CACNA1E-206ENST00000367573 HSP90AA1P07900 732 aaKnown RBP14.59□□□□□ -0.07
CACNA1E-206ENST00000367573 LMOD2Q6P5Q4 547 aa14.58□□□□□ -0.08
CACNA1E-206ENST00000367573 CSRNP3Q8WYN3 585 aa14.57□□□□□ -0.08
CACNA1E-206ENST00000367573 TSPY4P0CV99 314 aa14.57□□□□□ -0.08
CACNA1E-206ENST00000367573 TSPY10P0CW01 314 aa14.57□□□□□ -0.08
CACNA1E-206ENST00000367573 NPHP1O15259 732 aa14.55□□□□□ -0.08
CACNA1E-206ENST00000367573 TULP1O00294 542 aaPredicted RBP14.52□□□□□ -0.09
CACNA1E-206ENST00000367573 TONSLQ96HA7 1378 aa14.51□□□□□ -0.09
CACNA1E-206ENST00000367573 FAM9BQ8IZU0 186 aa14.47□□□□□ -0.09
CACNA1E-206ENST00000367573 TMC1Q8TDI8 760 aa14.47□□□□□ -0.09
CACNA1E-206ENST00000367573 WDR43Q15061 677 aaKnown RBP eCLIP14.47□□□□□ -0.09
CACNA1E-206ENST00000367573 ERCC6Q03468 1493 aa14.45□□□□□ -0.1
CACNA1E-206ENST00000367573 CDK11BP21127 795 aaKnown RBP14.44□□□□□ -0.1
CACNA1E-206ENST00000367573 PPM1GO15355 546 aaPredicted RBP14.43□□□□□ -0.1
CACNA1E-206ENST00000367573 MLECQ14165 292 aa14.42□□□□□ -0.1
CACNA1E-206ENST00000367573 UPF2Q9HAU5 1272 aaKnown RBP14.4□□□□□ -0.1
CACNA1E-206ENST00000367573 ANP32AP39687 249 aaKnown RBP14.39□□□□□ -0.11
CACNA1E-206ENST00000367573 RGL3Q3MIN7 710 aa14.38□□□□□ -0.11
CACNA1E-206ENST00000367573 MTUS2Q5JR59 1369 aa14.38□□□□□ -0.11
CACNA1E-206ENST00000367573 ANP32BQ92688 251 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms