RNA–Protein interactions for RNA: ENST00000454455.5

LINC01304-204, Transcript of long intergenic non-protein coding RNA 1304, humanhuman

TSL 1 (best) BASIC

Gene LINC01304, Length 2,454 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01304-204ENST00000454455 NISCHQ9Y2I1 1504 aa17.79■□□□□ 0.44
LINC01304-204ENST00000454455 HRCP23327 699 aa16.06■□□□□ 0.16
LINC01304-204ENST00000454455 SHROOM4Q9ULL8 1493 aa15.81■□□□□ 0.12
LINC01304-204ENST00000454455 PPARGC1BQ86YN6 1023 aaKnown RBP15.76■□□□□ 0.11
LINC01304-204ENST00000454455 SUPT5HO00267 1087 aaKnown RBP15.73■□□□□ 0.11
LINC01304-204ENST00000454455 MYO15BQ96JP2 1530 aa15.72■□□□□ 0.11
LINC01304-204ENST00000454455 PCGF6Q9BYE7 350 aa15.7■□□□□ 0.1
LINC01304-204ENST00000454455 CHIC1Q5VXU3 224 aa15.5■□□□□ 0.07
LINC01304-204ENST00000454455 PELP1Q8IZL8 1130 aaKnown RBP15.49■□□□□ 0.07
LINC01304-204ENST00000454455 DCAF1Q9Y4B6 1507 aa15.35■□□□□ 0.05
LINC01304-204ENST00000454455 SCAF1Q9H7N4 1312 aaKnown RBP15.25■□□□□ 0.03
LINC01304-204ENST00000454455 CCDC180Q9P1Z9 1646 aa15.21■□□□□ 0.02
LINC01304-204ENST00000454455 ZCCHC6Q5VYS8 1495 aaKnown RBP15.18■□□□□ 0.02
LINC01304-204ENST00000454455 LOC105371045A0A1W2PR82 267 aa15.16■□□□□ 0.02
LINC01304-204ENST00000454455 TRIM26Q12899 539 aaPredicted RBP15.15■□□□□ 0.02
LINC01304-204ENST00000454455 ZEB1P37275 1124 aaPredicted RBP15.01□□□□□ -0.01
LINC01304-204ENST00000454455 MYT1Q01538 1121 aa14.88□□□□□ -0.03
LINC01304-204ENST00000454455 ACIN1Q9UKV3 1341 aaKnown RBP14.82□□□□□ -0.04
LINC01304-204ENST00000454455 NEUROD1Q13562 356 aa14.8□□□□□ -0.04
LINC01304-204ENST00000454455 DCAF8L2P0C7V8 631 aa14.73□□□□□ -0.05
LINC01304-204ENST00000454455 GTF3C3Q9Y5Q9 886 aa14.71□□□□□ -0.05
LINC01304-204ENST00000454455 CENPBP07199 599 aaPredicted RBP14.58□□□□□ -0.07
LINC01304-204ENST00000454455 FAM9AQ8IZU1 332 aaPredicted RBP14.55□□□□□ -0.08
LINC01304-204ENST00000454455 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.54□□□□□ -0.08
LINC01304-204ENST00000454455 DIEXFQ68CQ4 756 aaKnown RBP14.53□□□□□ -0.08
LINC01304-204ENST00000454455 TRIM41Q8WV44 630 aa14.51□□□□□ -0.09
LINC01304-204ENST00000454455 EHMT2Q96KQ7 1210 aa14.51□□□□□ -0.09
LINC01304-204ENST00000454455 CCER1Q8TC90 406 aaPredicted RBP14.49□□□□□ -0.09
LINC01304-204ENST00000454455 ABCC9O60706 1549 aa14.46□□□□□ -0.09
LINC01304-204ENST00000454455 RB1CC1Q8TDY2 1594 aa14.37□□□□□ -0.11
LINC01304-204ENST00000454455 RSF1Q96T23 1441 aaPredicted RBP14.34□□□□□ -0.11
LINC01304-204ENST00000454455 YTHDC1Q96MU7 727 aaKnown RBP14.33□□□□□ -0.12
LINC01304-204ENST00000454455 ZNF316A6NFI3 1004 aaPredicted RBP14.23□□□□□ -0.13
LINC01304-204ENST00000454455 TTBK1Q5TCY1 1321 aaPredicted RBP14.2□□□□□ -0.14
LINC01304-204ENST00000454455 MIER1Q8N108 512 aa14.17□□□□□ -0.14
LINC01304-204ENST00000454455 SCRIBQ14160 1630 aa14.13□□□□□ -0.15
LINC01304-204ENST00000454455 WRNQ14191 1432 aaPredicted RBP eCLIP14.07□□□□□ -0.16
LINC01304-204ENST00000454455 BCL11AQ9H165 835 aa14.02□□□□□ -0.16
LINC01304-204ENST00000454455 CEP162Q5TB80 1403 aa14□□□□□ -0.17
LINC01304-204ENST00000454455 SUPT16HQ9Y5B9 1047 aaKnown RBP14□□□□□ -0.17
LINC01304-204ENST00000454455 ANP32EQ9BTT0 268 aa13.99□□□□□ -0.17
LINC01304-204ENST00000454455 EIF4G1Q04637 1599 aaKnown RBP13.96□□□□□ -0.18
LINC01304-204ENST00000454455 TSHZ2Q9NRE2 1034 aa13.96□□□□□ -0.18
LINC01304-204ENST00000454455 CECR2Q9BXF3 1484 aa13.94□□□□□ -0.18
LINC01304-204ENST00000454455 MROH2BQ7Z745 1585 aa13.93□□□□□ -0.18
LINC01304-204ENST00000454455 WIZO95785 1651 aa13.92□□□□□ -0.18
LINC01304-204ENST00000454455 CLSPNQ9HAW4 1339 aa13.91□□□□□ -0.18
LINC01304-204ENST00000454455 HNRNPUL2Q1KMD3 747 aaKnown RBP13.87□□□□□ -0.19
LINC01304-204ENST00000454455 CSRNP3Q8WYN3 585 aa13.86□□□□□ -0.19
LINC01304-204ENST00000454455 TNIKQ9UKE5 1360 aa13.86□□□□□ -0.19
LINC01304-204ENST00000454455 CCDC88BA6NC98 1476 aa13.86□□□□□ -0.19
LINC01304-204ENST00000454455 ABCC8Q09428 1581 aa13.86□□□□□ -0.19
LINC01304-204ENST00000454455 NACADO15069 1562 aa13.85□□□□□ -0.19
LINC01304-204ENST00000454455 BAZ1AQ9NRL2 1556 aaPredicted RBP13.81□□□□□ -0.2
LINC01304-204ENST00000454455 SOGA1O94964 1423 aa13.81□□□□□ -0.2
LINC01304-204ENST00000454455 UBTFP17480 764 aaKnown RBP13.76□□□□□ -0.21
LINC01304-204ENST00000454455 RUSC2Q8N2Y8 1516 aa13.74□□□□□ -0.21
LINC01304-204ENST00000454455 GOLGA3Q08378 1498 aa13.71□□□□□ -0.22
LINC01304-204ENST00000454455 BCANQ96GW7 911 aa13.7□□□□□ -0.22
LINC01304-204ENST00000454455 EEA1Q15075 1411 aa13.68□□□□□ -0.22
LINC01304-204ENST00000454455 KCNH8Q96L42 1107 aa13.64□□□□□ -0.23
LINC01304-204ENST00000454455 DHX57Q6P158 1386 aaKnown RBP13.63□□□□□ -0.23
LINC01304-204ENST00000454455 TOP2AP11388 1531 aaKnown RBP13.61□□□□□ -0.23
LINC01304-204ENST00000454455 FKBP8Q14318 412 aa13.6□□□□□ -0.23
LINC01304-204ENST00000454455 RBM19Q9Y4C8 960 aaKnown RBP13.6□□□□□ -0.23
LINC01304-204ENST00000454455 SMARCA2P51531 1590 aa13.6□□□□□ -0.23
LINC01304-204ENST00000454455 CLIP1P30622 1438 aa13.6□□□□□ -0.23
LINC01304-204ENST00000454455 VPS8Q8N3P4 1428 aa13.59□□□□□ -0.23
LINC01304-204ENST00000454455 CEP164Q9UPV0 1460 aa13.54□□□□□ -0.24
LINC01304-204ENST00000454455 KIF21BO75037 1637 aa13.54□□□□□ -0.24
LINC01304-204ENST00000454455 APLP2Q06481 763 aa13.53□□□□□ -0.24
LINC01304-204ENST00000454455 MSH5O43196 834 aa13.52□□□□□ -0.24
LINC01304-204ENST00000454455 ITGAEP38570 1179 aa13.5□□□□□ -0.25
LINC01304-204ENST00000454455 RANGAP1P46060 587 aaPredicted RBP13.47□□□□□ -0.25
LINC01304-204ENST00000454455 PRKCSHP14314 528 aaPredicted RBP13.46□□□□□ -0.25
LINC01304-204ENST00000454455 SMARCA4P51532 1647 aa13.46□□□□□ -0.26
LINC01304-204ENST00000454455 NEFLP07196 543 aa13.45□□□□□ -0.26
LINC01304-204ENST00000454455 RAPGEF2Q9Y4G8 1499 aa13.43□□□□□ -0.26
LINC01304-204ENST00000454455 BAZ1BQ9UIG0 1483 aaKnown RBP13.43□□□□□ -0.26
LINC01304-204ENST00000454455 SYNJ1O43426 1573 aa13.42□□□□□ -0.26
LINC01304-204ENST00000454455 UNC13AQ9UPW8 1703 aa13.39□□□□□ -0.27
LINC01304-204ENST00000454455 DDX10Q13206 875 aaKnown RBP13.38□□□□□ -0.27
LINC01304-204ENST00000454455 TRIM52Q96A61 297 aa13.38□□□□□ -0.27
LINC01304-204ENST00000454455 KANK4Q5T7N3 995 aaPredicted RBP13.37□□□□□ -0.27
LINC01304-204ENST00000454455 CUX2O14529 1486 aa13.37□□□□□ -0.27
LINC01304-204ENST00000454455 FANCIQ9NVI1 1328 aa13.35□□□□□ -0.27
LINC01304-204ENST00000454455 RRBP1Q9P2E9 1410 aaKnown RBP13.35□□□□□ -0.27
LINC01304-204ENST00000454455 ERICH6Q7L0X2 663 aa13.35□□□□□ -0.27
LINC01304-204ENST00000454455 MAPKBP1O60336 1514 aa13.35□□□□□ -0.27
LINC01304-204ENST00000454455 ARAP1Q96P48 1450 aa13.33□□□□□ -0.28
LINC01304-204ENST00000454455 WDR97A6NE52 1622 aa13.32□□□□□ -0.28
LINC01304-204ENST00000454455 PPP1R15AO75807 674 aaPredicted RBP13.3□□□□□ -0.28
LINC01304-204ENST00000454455 CCNB3Q8WWL7 1395 aa13.28□□□□□ -0.28
LINC01304-204ENST00000454455 RAB3GAP2Q9H2M9 1393 aa13.27□□□□□ -0.28
LINC01304-204ENST00000454455 DEKP35659 375 aaKnown RBP13.27□□□□□ -0.29
LINC01304-204ENST00000454455 CCER2I3L3R5 266 aa13.26□□□□□ -0.29
LINC01304-204ENST00000454455 IRX6P78412 446 aaPredicted RBP13.25□□□□□ -0.29
LINC01304-204ENST00000454455 CDK11AQ9UQ88 783 aaPredicted RBP13.25□□□□□ -0.29
LINC01304-204ENST00000454455 HIRIP3Q9BW71 556 aaPredicted RBP13.25□□□□□ -0.29
LINC01304-204ENST00000454455 BICRAQ9NZM4 1560 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms