Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CTDP1Q9Y5B0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC23.85■■□□□ 1.41
CTDP1Q9Y5B0 AC006058.3-201ENST00000606217 1069 ntBASIC23.85■■□□□ 1.41
CTDP1Q9Y5B0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CTDP1Q9Y5B0 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CTDP1Q9Y5B0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
CTDP1Q9Y5B0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CTDP1Q9Y5B0 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CTDP1Q9Y5B0 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC23.84■■□□□ 1.41
CTDP1Q9Y5B0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CTDP1Q9Y5B0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.84■■□□□ 1.41
CTDP1Q9Y5B0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC23.84■■□□□ 1.41
CTDP1Q9Y5B0 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CTDP1Q9Y5B0 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
CTDP1Q9Y5B0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC23.84■■□□□ 1.41
CTDP1Q9Y5B0 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CTDP1Q9Y5B0 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CTDP1Q9Y5B0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
CTDP1Q9Y5B0 ADM-205ENST00000528544 586 ntTSL 2 BASIC23.84■■□□□ 1.41
CTDP1Q9Y5B0 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC23.84■■□□□ 1.41
CTDP1Q9Y5B0 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC23.84■■□□□ 1.41
CTDP1Q9Y5B0 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CTDP1Q9Y5B0 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CTDP1Q9Y5B0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CTDP1Q9Y5B0 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CTDP1Q9Y5B0 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
CTDP1Q9Y5B0 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.83■■□□□ 1.41
CTDP1Q9Y5B0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CTDP1Q9Y5B0 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CTDP1Q9Y5B0 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CTDP1Q9Y5B0 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
CTDP1Q9Y5B0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC23.83■■□□□ 1.41
CTDP1Q9Y5B0 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CTDP1Q9Y5B0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
CTDP1Q9Y5B0 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
CTDP1Q9Y5B0 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CTDP1Q9Y5B0 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC23.83■■□□□ 1.41
CTDP1Q9Y5B0 MMAB-206ENST00000540016 945 ntTSL 3 BASIC23.83■■□□□ 1.41
CTDP1Q9Y5B0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
CTDP1Q9Y5B0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
CTDP1Q9Y5B0 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CTDP1Q9Y5B0 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
CTDP1Q9Y5B0 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CTDP1Q9Y5B0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC23.83■■□□□ 1.41
CTDP1Q9Y5B0 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CTDP1Q9Y5B0 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CTDP1Q9Y5B0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
CTDP1Q9Y5B0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.4
CTDP1Q9Y5B0 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.4
CTDP1Q9Y5B0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.4
CTDP1Q9Y5B0 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CTDP1Q9Y5B0 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CTDP1Q9Y5B0 CYP21A1P-202ENST00000354927 1481 ntBASIC23.82■■□□□ 1.4
CTDP1Q9Y5B0 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC23.82■■□□□ 1.4
CTDP1Q9Y5B0 ECEL1P1-201ENST00000373592 1742 ntBASIC23.82■■□□□ 1.4
CTDP1Q9Y5B0 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CTDP1Q9Y5B0 PRORSD1P-201ENST00000295112 541 ntBASIC23.82■■□□□ 1.4
CTDP1Q9Y5B0 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC23.82■■□□□ 1.4
CTDP1Q9Y5B0 UNC93B5-201ENST00000530315 699 ntBASIC23.82■■□□□ 1.4
CTDP1Q9Y5B0 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC23.82■■□□□ 1.4
CTDP1Q9Y5B0 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC23.82■■□□□ 1.4
CTDP1Q9Y5B0 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CTDP1Q9Y5B0 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CTDP1Q9Y5B0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CTDP1Q9Y5B0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC23.81■■□□□ 1.4
CTDP1Q9Y5B0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CTDP1Q9Y5B0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CTDP1Q9Y5B0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
CTDP1Q9Y5B0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CTDP1Q9Y5B0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC23.81■■□□□ 1.4
CTDP1Q9Y5B0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC23.81■■□□□ 1.4
CTDP1Q9Y5B0 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CTDP1Q9Y5B0 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CTDP1Q9Y5B0 AC026366.1-201ENST00000488803 879 ntBASIC23.81■■□□□ 1.4
CTDP1Q9Y5B0 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC23.81■■□□□ 1.4
CTDP1Q9Y5B0 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC23.81■■□□□ 1.4
CTDP1Q9Y5B0 AP003097.1-201ENST00000530657 1135 ntBASIC23.81■■□□□ 1.4
CTDP1Q9Y5B0 AC060766.5-201ENST00000590539 871 ntBASIC23.81■■□□□ 1.4
CTDP1Q9Y5B0 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CTDP1Q9Y5B0 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CTDP1Q9Y5B0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CTDP1Q9Y5B0 NXN-202ENST00000537628 1340 ntTSL 3 BASIC23.81■■□□□ 1.4
CTDP1Q9Y5B0 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
CTDP1Q9Y5B0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CTDP1Q9Y5B0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.8■■□□□ 1.4
CTDP1Q9Y5B0 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CTDP1Q9Y5B0 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CTDP1Q9Y5B0 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CTDP1Q9Y5B0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CTDP1Q9Y5B0 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CTDP1Q9Y5B0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CTDP1Q9Y5B0 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CTDP1Q9Y5B0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CTDP1Q9Y5B0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CTDP1Q9Y5B0 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CTDP1Q9Y5B0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC23.8■■□□□ 1.4
CTDP1Q9Y5B0 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC23.8■■□□□ 1.4
CTDP1Q9Y5B0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CTDP1Q9Y5B0 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CTDP1Q9Y5B0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms