Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRCH1Q9Y2L9 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRCH1Q9Y2L9 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.57■□□□□ 0.72
LRCH1Q9Y2L9 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.57■□□□□ 0.72
LRCH1Q9Y2L9 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRCH1Q9Y2L9 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
LRCH1Q9Y2L9 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRCH1Q9Y2L9 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LRCH1Q9Y2L9 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
LRCH1Q9Y2L9 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.57■□□□□ 0.72
LRCH1Q9Y2L9 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.57■□□□□ 0.72
LRCH1Q9Y2L9 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LRCH1Q9Y2L9 KRT125P-201ENST00000546827 989 ntBASIC19.57■□□□□ 0.72
LRCH1Q9Y2L9 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.57■□□□□ 0.72
LRCH1Q9Y2L9 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRCH1Q9Y2L9 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
LRCH1Q9Y2L9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRCH1Q9Y2L9 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
LRCH1Q9Y2L9 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LRCH1Q9Y2L9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.57■□□□□ 0.72
LRCH1Q9Y2L9 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRCH1Q9Y2L9 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
LRCH1Q9Y2L9 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRCH1Q9Y2L9 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRCH1Q9Y2L9 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRCH1Q9Y2L9 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.56■□□□□ 0.72
LRCH1Q9Y2L9 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.56■□□□□ 0.72
LRCH1Q9Y2L9 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRCH1Q9Y2L9 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRCH1Q9Y2L9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
LRCH1Q9Y2L9 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRCH1Q9Y2L9 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
LRCH1Q9Y2L9 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRCH1Q9Y2L9 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.55■□□□□ 0.72
LRCH1Q9Y2L9 TCF3P1-201ENST00000423021 1937 ntBASIC19.55■□□□□ 0.72
LRCH1Q9Y2L9 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRCH1Q9Y2L9 AL158211.5-201ENST00000623583 2518 ntBASIC19.55■□□□□ 0.72
LRCH1Q9Y2L9 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRCH1Q9Y2L9 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.55■□□□□ 0.72
LRCH1Q9Y2L9 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
LRCH1Q9Y2L9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRCH1Q9Y2L9 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRCH1Q9Y2L9 GUSBP5-201ENST00000418136 578 ntBASIC19.55■□□□□ 0.72
LRCH1Q9Y2L9 AC239859.2-201ENST00000444165 318 ntBASIC19.55■□□□□ 0.72
LRCH1Q9Y2L9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.55■□□□□ 0.72
LRCH1Q9Y2L9 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.55■□□□□ 0.72
LRCH1Q9Y2L9 AC137630.3-201ENST00000607245 391 ntBASIC19.55■□□□□ 0.72
LRCH1Q9Y2L9 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.55■□□□□ 0.72
LRCH1Q9Y2L9 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRCH1Q9Y2L9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRCH1Q9Y2L9 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRCH1Q9Y2L9 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
LRCH1Q9Y2L9 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRCH1Q9Y2L9 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRCH1Q9Y2L9 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRCH1Q9Y2L9 AC093503.3-201ENST00000624917 2352 ntBASIC19.55■□□□□ 0.72
LRCH1Q9Y2L9 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRCH1Q9Y2L9 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.54■□□□□ 0.72
LRCH1Q9Y2L9 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRCH1Q9Y2L9 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.54■□□□□ 0.72
LRCH1Q9Y2L9 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRCH1Q9Y2L9 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.54■□□□□ 0.72
LRCH1Q9Y2L9 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRCH1Q9Y2L9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
LRCH1Q9Y2L9 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRCH1Q9Y2L9 MIR4281-201ENST00000580852 62 ntBASIC19.54■□□□□ 0.72
LRCH1Q9Y2L9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.54■□□□□ 0.72
LRCH1Q9Y2L9 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
LRCH1Q9Y2L9 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.54■□□□□ 0.72
LRCH1Q9Y2L9 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRCH1Q9Y2L9 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRCH1Q9Y2L9 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRCH1Q9Y2L9 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.53■□□□□ 0.72
LRCH1Q9Y2L9 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRCH1Q9Y2L9 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRCH1Q9Y2L9 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRCH1Q9Y2L9 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.53■□□□□ 0.72
LRCH1Q9Y2L9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.53■□□□□ 0.72
LRCH1Q9Y2L9 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.53■□□□□ 0.72
LRCH1Q9Y2L9 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRCH1Q9Y2L9 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.53■□□□□ 0.72
LRCH1Q9Y2L9 DUX4L4-201ENST00000566884 1269 ntBASIC19.53■□□□□ 0.72
LRCH1Q9Y2L9 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
LRCH1Q9Y2L9 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRCH1Q9Y2L9 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
LRCH1Q9Y2L9 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.53■□□□□ 0.72
LRCH1Q9Y2L9 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.53■□□□□ 0.72
LRCH1Q9Y2L9 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.53■□□□□ 0.72
LRCH1Q9Y2L9 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.53■□□□□ 0.72
LRCH1Q9Y2L9 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRCH1Q9Y2L9 AC125437.2-201ENST00000625180 2167 ntBASIC19.53■□□□□ 0.72
LRCH1Q9Y2L9 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.53■□□□□ 0.72
LRCH1Q9Y2L9 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRCH1Q9Y2L9 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
LRCH1Q9Y2L9 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRCH1Q9Y2L9 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
LRCH1Q9Y2L9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.52■□□□□ 0.72
LRCH1Q9Y2L9 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.52■□□□□ 0.72
LRCH1Q9Y2L9 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
LRCH1Q9Y2L9 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms