Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
PCDHGC3Q9UN70 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGC3Q9UN70 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGC3Q9UN70 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGC3Q9UN70 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGC3Q9UN70 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGC3Q9UN70 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGC3Q9UN70 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.8■■□□□ 1.08
PCDHGC3Q9UN70 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDHGC3Q9UN70 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDHGC3Q9UN70 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGC3Q9UN70 FAM21FP-204ENST00000608637 956 ntBASIC21.8■■□□□ 1.08
PCDHGC3Q9UN70 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.8■■□□□ 1.08
PCDHGC3Q9UN70 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGC3Q9UN70 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDHGC3Q9UN70 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGC3Q9UN70 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGC3Q9UN70 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
PCDHGC3Q9UN70 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGC3Q9UN70 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHGC3Q9UN70 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PCDHGC3Q9UN70 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGC3Q9UN70 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGC3Q9UN70 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGC3Q9UN70 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGC3Q9UN70 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDHGC3Q9UN70 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGC3Q9UN70 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGC3Q9UN70 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGC3Q9UN70 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHGC3Q9UN70 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGC3Q9UN70 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHGC3Q9UN70 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGC3Q9UN70 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGC3Q9UN70 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGC3Q9UN70 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PCDHGC3Q9UN70 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGC3Q9UN70 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHGC3Q9UN70 IKBKGP1-201ENST00000612193 1073 ntBASIC21.78■■□□□ 1.08
PCDHGC3Q9UN70 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
PCDHGC3Q9UN70 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.78■■□□□ 1.08
PCDHGC3Q9UN70 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
PCDHGC3Q9UN70 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PCDHGC3Q9UN70 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
PCDHGC3Q9UN70 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
PCDHGC3Q9UN70 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGC3Q9UN70 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGC3Q9UN70 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
PCDHGC3Q9UN70 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGC3Q9UN70 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGC3Q9UN70 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGC3Q9UN70 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
PCDHGC3Q9UN70 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.77■■□□□ 1.08
PCDHGC3Q9UN70 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
PCDHGC3Q9UN70 MIR2861-201ENST00000636310 90 ntBASIC21.77■■□□□ 1.08
PCDHGC3Q9UN70 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
PCDHGC3Q9UN70 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGC3Q9UN70 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGC3Q9UN70 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
PCDHGC3Q9UN70 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.77■■□□□ 1.07
PCDHGC3Q9UN70 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
PCDHGC3Q9UN70 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.07
PCDHGC3Q9UN70 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PCDHGC3Q9UN70 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGC3Q9UN70 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PCDHGC3Q9UN70 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.76■■□□□ 1.07
PCDHGC3Q9UN70 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.76■■□□□ 1.07
PCDHGC3Q9UN70 FEM1AP1-201ENST00000431297 1995 ntBASIC21.76■■□□□ 1.07
PCDHGC3Q9UN70 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
PCDHGC3Q9UN70 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGC3Q9UN70 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
PCDHGC3Q9UN70 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGC3Q9UN70 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGC3Q9UN70 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGC3Q9UN70 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGC3Q9UN70 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGC3Q9UN70 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
PCDHGC3Q9UN70 AC068338.2-201ENST00000563278 1430 ntBASIC21.76■■□□□ 1.07
PCDHGC3Q9UN70 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.76■■□□□ 1.07
PCDHGC3Q9UN70 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGC3Q9UN70 FP700111.2-201ENST00000619190 1892 ntBASIC21.76■■□□□ 1.07
PCDHGC3Q9UN70 AC231657.2-201ENST00000624556 255 ntBASIC21.76■■□□□ 1.07
PCDHGC3Q9UN70 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.76■■□□□ 1.07
PCDHGC3Q9UN70 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGC3Q9UN70 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGC3Q9UN70 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGC3Q9UN70 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
PCDHGC3Q9UN70 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGC3Q9UN70 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHGC3Q9UN70 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHGC3Q9UN70 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHGC3Q9UN70 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHGC3Q9UN70 AC016405.3-201ENST00000607710 860 ntBASIC21.75■■□□□ 1.07
PCDHGC3Q9UN70 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGC3Q9UN70 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
PCDHGC3Q9UN70 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
PCDHGC3Q9UN70 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGC3Q9UN70 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
PCDHGC3Q9UN70 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGC3Q9UN70 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms