Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC40Q9H9A6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.92■□□□□ 0.94
LRRC40Q9H9A6 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRRC40Q9H9A6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRRC40Q9H9A6 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRRC40Q9H9A6 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.92■□□□□ 0.94
LRRC40Q9H9A6 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.92■□□□□ 0.94
LRRC40Q9H9A6 AC034268.1-201ENST00000441047 882 ntBASIC20.92■□□□□ 0.94
LRRC40Q9H9A6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.92■□□□□ 0.94
LRRC40Q9H9A6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.92■□□□□ 0.94
LRRC40Q9H9A6 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRRC40Q9H9A6 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
LRRC40Q9H9A6 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRRC40Q9H9A6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRRC40Q9H9A6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRRC40Q9H9A6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
LRRC40Q9H9A6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
LRRC40Q9H9A6 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRRC40Q9H9A6 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRRC40Q9H9A6 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRRC40Q9H9A6 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRRC40Q9H9A6 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRRC40Q9H9A6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRRC40Q9H9A6 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRRC40Q9H9A6 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRRC40Q9H9A6 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRRC40Q9H9A6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRRC40Q9H9A6 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRRC40Q9H9A6 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRRC40Q9H9A6 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.91■□□□□ 0.94
LRRC40Q9H9A6 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRRC40Q9H9A6 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.91■□□□□ 0.94
LRRC40Q9H9A6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.91■□□□□ 0.94
LRRC40Q9H9A6 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.91■□□□□ 0.94
LRRC40Q9H9A6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.91■□□□□ 0.94
LRRC40Q9H9A6 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LRRC40Q9H9A6 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.91■□□□□ 0.94
LRRC40Q9H9A6 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.91■□□□□ 0.94
LRRC40Q9H9A6 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRRC40Q9H9A6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.91■□□□□ 0.94
LRRC40Q9H9A6 MIR6821-201ENST00000617625 74 ntBASIC20.91■□□□□ 0.94
LRRC40Q9H9A6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.91■□□□□ 0.94
LRRC40Q9H9A6 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRRC40Q9H9A6 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LRRC40Q9H9A6 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRRC40Q9H9A6 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRRC40Q9H9A6 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRRC40Q9H9A6 GABARAPL3-202ENST00000624044 1851 ntBASIC20.9■□□□□ 0.94
LRRC40Q9H9A6 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRRC40Q9H9A6 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.9■□□□□ 0.94
LRRC40Q9H9A6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
LRRC40Q9H9A6 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LRRC40Q9H9A6 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.9■□□□□ 0.94
LRRC40Q9H9A6 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LRRC40Q9H9A6 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.9■□□□□ 0.94
LRRC40Q9H9A6 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
LRRC40Q9H9A6 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.9■□□□□ 0.94
LRRC40Q9H9A6 AC243732.1-201ENST00000612648 864 ntBASIC20.9■□□□□ 0.94
LRRC40Q9H9A6 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.9■□□□□ 0.94
LRRC40Q9H9A6 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRRC40Q9H9A6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRRC40Q9H9A6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRRC40Q9H9A6 AP005212.1-201ENST00000581547 1997 ntBASIC20.9■□□□□ 0.94
LRRC40Q9H9A6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
LRRC40Q9H9A6 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
LRRC40Q9H9A6 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LRRC40Q9H9A6 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LRRC40Q9H9A6 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.89■□□□□ 0.94
LRRC40Q9H9A6 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRRC40Q9H9A6 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRRC40Q9H9A6 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRRC40Q9H9A6 AC019069.1-201ENST00000610008 1333 ntBASIC20.89■□□□□ 0.93
LRRC40Q9H9A6 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRRC40Q9H9A6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LRRC40Q9H9A6 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LRRC40Q9H9A6 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.89■□□□□ 0.93
LRRC40Q9H9A6 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.89■□□□□ 0.93
LRRC40Q9H9A6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.89■□□□□ 0.93
LRRC40Q9H9A6 NTF6G-201ENST00000591094 616 ntBASIC20.89■□□□□ 0.93
LRRC40Q9H9A6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRRC40Q9H9A6 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LRRC40Q9H9A6 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRRC40Q9H9A6 AC116050.2-201ENST00000612102 1779 ntBASIC20.89■□□□□ 0.93
LRRC40Q9H9A6 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRRC40Q9H9A6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.89■□□□□ 0.93
LRRC40Q9H9A6 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRRC40Q9H9A6 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LRRC40Q9H9A6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.88■□□□□ 0.93
LRRC40Q9H9A6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.88■□□□□ 0.93
LRRC40Q9H9A6 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
LRRC40Q9H9A6 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRRC40Q9H9A6 FP700111.2-201ENST00000619190 1892 ntBASIC20.88■□□□□ 0.93
LRRC40Q9H9A6 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.88■□□□□ 0.93
LRRC40Q9H9A6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
LRRC40Q9H9A6 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LRRC40Q9H9A6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.88■□□□□ 0.93
LRRC40Q9H9A6 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LRRC40Q9H9A6 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.88■□□□□ 0.93
LRRC40Q9H9A6 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LRRC40Q9H9A6 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms