Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC22.33■■□□□ 1.17
NUCKS1Q9H1E3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC22.33■■□□□ 1.17
NUCKS1Q9H1E3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
NUCKS1Q9H1E3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
NUCKS1Q9H1E3 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
NUCKS1Q9H1E3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
NUCKS1Q9H1E3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.33■■□□□ 1.17
NUCKS1Q9H1E3 AC008175.2-201ENST00000612840 297 ntBASIC22.33■■□□□ 1.17
NUCKS1Q9H1E3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC22.33■■□□□ 1.16
NUCKS1Q9H1E3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
NUCKS1Q9H1E3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
NUCKS1Q9H1E3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22.33■■□□□ 1.16
NUCKS1Q9H1E3 AC061975.6-201ENST00000579045 1553 ntBASIC22.33■■□□□ 1.16
NUCKS1Q9H1E3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
NUCKS1Q9H1E3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
NUCKS1Q9H1E3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC22.32■■□□□ 1.16
NUCKS1Q9H1E3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC22.32■■□□□ 1.16
NUCKS1Q9H1E3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
NUCKS1Q9H1E3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
NUCKS1Q9H1E3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
NUCKS1Q9H1E3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
NUCKS1Q9H1E3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
NUCKS1Q9H1E3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NUCKS1Q9H1E3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
NUCKS1Q9H1E3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NUCKS1Q9H1E3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.32■■□□□ 1.16
NUCKS1Q9H1E3 AC034268.1-201ENST00000441047 882 ntBASIC22.32■■□□□ 1.16
NUCKS1Q9H1E3 TERF1P2-201ENST00000583350 1212 ntBASIC22.32■■□□□ 1.16
NUCKS1Q9H1E3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.32■■□□□ 1.16
NUCKS1Q9H1E3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NUCKS1Q9H1E3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
NUCKS1Q9H1E3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NUCKS1Q9H1E3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC22.32■■□□□ 1.16
NUCKS1Q9H1E3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
NUCKS1Q9H1E3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
NUCKS1Q9H1E3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC22.31■■□□□ 1.16
NUCKS1Q9H1E3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC22.31■■□□□ 1.16
NUCKS1Q9H1E3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
NUCKS1Q9H1E3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NUCKS1Q9H1E3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
NUCKS1Q9H1E3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
NUCKS1Q9H1E3 AL162430.1-201ENST00000480705 870 ntBASIC22.31■■□□□ 1.16
NUCKS1Q9H1E3 KRT18P14-201ENST00000534205 1250 ntBASIC22.31■■□□□ 1.16
NUCKS1Q9H1E3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NUCKS1Q9H1E3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NUCKS1Q9H1E3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
NUCKS1Q9H1E3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC22.31■■□□□ 1.16
NUCKS1Q9H1E3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.31■■□□□ 1.16
NUCKS1Q9H1E3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
NUCKS1Q9H1E3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC22.3■■□□□ 1.16
NUCKS1Q9H1E3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NUCKS1Q9H1E3 FP700111.2-201ENST00000619190 1892 ntBASIC22.3■■□□□ 1.16
NUCKS1Q9H1E3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NUCKS1Q9H1E3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NUCKS1Q9H1E3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
NUCKS1Q9H1E3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NUCKS1Q9H1E3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
NUCKS1Q9H1E3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
NUCKS1Q9H1E3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
NUCKS1Q9H1E3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
NUCKS1Q9H1E3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
NUCKS1Q9H1E3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.3■■□□□ 1.16
NUCKS1Q9H1E3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
NUCKS1Q9H1E3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
NUCKS1Q9H1E3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NUCKS1Q9H1E3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NUCKS1Q9H1E3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NUCKS1Q9H1E3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC22.29■■□□□ 1.16
NUCKS1Q9H1E3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
NUCKS1Q9H1E3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NUCKS1Q9H1E3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
NUCKS1Q9H1E3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
NUCKS1Q9H1E3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NUCKS1Q9H1E3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
NUCKS1Q9H1E3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
NUCKS1Q9H1E3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
NUCKS1Q9H1E3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.29■■□□□ 1.16
NUCKS1Q9H1E3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.29■■□□□ 1.16
NUCKS1Q9H1E3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.29■■□□□ 1.16
NUCKS1Q9H1E3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
NUCKS1Q9H1E3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC22.29■■□□□ 1.16
NUCKS1Q9H1E3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
NUCKS1Q9H1E3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
NUCKS1Q9H1E3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
NUCKS1Q9H1E3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
NUCKS1Q9H1E3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
NUCKS1Q9H1E3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NUCKS1Q9H1E3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
NUCKS1Q9H1E3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NUCKS1Q9H1E3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.28■■□□□ 1.16
NUCKS1Q9H1E3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.28■■□□□ 1.16
NUCKS1Q9H1E3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
NUCKS1Q9H1E3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
NUCKS1Q9H1E3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NUCKS1Q9H1E3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NUCKS1Q9H1E3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC22.27■■□□□ 1.16
NUCKS1Q9H1E3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC22.27■■□□□ 1.16
NUCKS1Q9H1E3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
NUCKS1Q9H1E3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
NUCKS1Q9H1E3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms