Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 BX005040.4-201ENST00000637145 1518 ntBASIC17.67■□□□□ 0.42
NICN1Q9BSH3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.67■□□□□ 0.42
NICN1Q9BSH3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
NICN1Q9BSH3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NICN1Q9BSH3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
NICN1Q9BSH3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.66■□□□□ 0.42
NICN1Q9BSH3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.66■□□□□ 0.42
NICN1Q9BSH3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NICN1Q9BSH3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NICN1Q9BSH3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NICN1Q9BSH3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NICN1Q9BSH3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NICN1Q9BSH3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.66■□□□□ 0.42
NICN1Q9BSH3 AC005224.4-201ENST00000583262 1652 ntBASIC17.66■□□□□ 0.42
NICN1Q9BSH3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NICN1Q9BSH3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NICN1Q9BSH3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
NICN1Q9BSH3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NICN1Q9BSH3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
NICN1Q9BSH3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NICN1Q9BSH3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
NICN1Q9BSH3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
NICN1Q9BSH3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
NICN1Q9BSH3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
NICN1Q9BSH3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
NICN1Q9BSH3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
NICN1Q9BSH3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NICN1Q9BSH3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NICN1Q9BSH3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NICN1Q9BSH3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NICN1Q9BSH3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.65■□□□□ 0.42
NICN1Q9BSH3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NICN1Q9BSH3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NICN1Q9BSH3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.65■□□□□ 0.42
NICN1Q9BSH3 AC024257.2-201ENST00000549699 147 ntBASIC17.65■□□□□ 0.42
NICN1Q9BSH3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.65■□□□□ 0.42
NICN1Q9BSH3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.65■□□□□ 0.42
NICN1Q9BSH3 AC007952.6-201ENST00000573168 2673 ntBASIC17.65■□□□□ 0.42
NICN1Q9BSH3 AC003957.1-201ENST00000625108 2673 ntBASIC17.65■□□□□ 0.42
NICN1Q9BSH3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NICN1Q9BSH3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NICN1Q9BSH3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
NICN1Q9BSH3 AL512408.1-201ENST00000569378 2000 ntBASIC17.65■□□□□ 0.42
NICN1Q9BSH3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.65■□□□□ 0.42
NICN1Q9BSH3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
NICN1Q9BSH3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NICN1Q9BSH3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NICN1Q9BSH3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.65■□□□□ 0.42
NICN1Q9BSH3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NICN1Q9BSH3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.64■□□□□ 0.41
NICN1Q9BSH3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
NICN1Q9BSH3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NICN1Q9BSH3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.64■□□□□ 0.41
NICN1Q9BSH3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NICN1Q9BSH3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NICN1Q9BSH3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
NICN1Q9BSH3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
NICN1Q9BSH3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NICN1Q9BSH3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NICN1Q9BSH3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NICN1Q9BSH3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.64■□□□□ 0.41
NICN1Q9BSH3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.64■□□□□ 0.41
NICN1Q9BSH3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
NICN1Q9BSH3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NICN1Q9BSH3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
NICN1Q9BSH3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.64■□□□□ 0.41
NICN1Q9BSH3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NICN1Q9BSH3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NICN1Q9BSH3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NICN1Q9BSH3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NICN1Q9BSH3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NICN1Q9BSH3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NICN1Q9BSH3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.63■□□□□ 0.41
NICN1Q9BSH3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.63■□□□□ 0.41
NICN1Q9BSH3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NICN1Q9BSH3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
NICN1Q9BSH3 AC105233.4-201ENST00000642045 216 ntBASIC17.63■□□□□ 0.41
NICN1Q9BSH3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NICN1Q9BSH3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NICN1Q9BSH3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
NICN1Q9BSH3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NICN1Q9BSH3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.63■□□□□ 0.41
NICN1Q9BSH3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
NICN1Q9BSH3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.63■□□□□ 0.41
NICN1Q9BSH3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
NICN1Q9BSH3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NICN1Q9BSH3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NICN1Q9BSH3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NICN1Q9BSH3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NICN1Q9BSH3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NICN1Q9BSH3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.62■□□□□ 0.41
NICN1Q9BSH3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.62■□□□□ 0.41
NICN1Q9BSH3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NICN1Q9BSH3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
NICN1Q9BSH3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.62■□□□□ 0.41
NICN1Q9BSH3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.62■□□□□ 0.41
NICN1Q9BSH3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NICN1Q9BSH3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.62■□□□□ 0.41
NICN1Q9BSH3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NICN1Q9BSH3 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms