Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CALR3Q96L12 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CALR3Q96L12 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CALR3Q96L12 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CALR3Q96L12 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.79■■□□□ 1.08
CALR3Q96L12 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CALR3Q96L12 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.79■■□□□ 1.08
CALR3Q96L12 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CALR3Q96L12 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.79■■□□□ 1.08
CALR3Q96L12 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.79■■□□□ 1.08
CALR3Q96L12 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CALR3Q96L12 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CALR3Q96L12 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CALR3Q96L12 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CALR3Q96L12 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.78■■□□□ 1.08
CALR3Q96L12 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CALR3Q96L12 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CALR3Q96L12 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
CALR3Q96L12 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CALR3Q96L12 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.78■■□□□ 1.08
CALR3Q96L12 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.78■■□□□ 1.08
CALR3Q96L12 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CALR3Q96L12 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.78■■□□□ 1.08
CALR3Q96L12 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CALR3Q96L12 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.78■■□□□ 1.08
CALR3Q96L12 KRT87P-202ENST00000534226 1464 ntBASIC21.77■■□□□ 1.08
CALR3Q96L12 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CALR3Q96L12 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.77■■□□□ 1.08
CALR3Q96L12 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.77■■□□□ 1.08
CALR3Q96L12 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CALR3Q96L12 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CALR3Q96L12 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CALR3Q96L12 AC007952.6-201ENST00000573168 2673 ntBASIC21.77■■□□□ 1.08
CALR3Q96L12 AC003957.1-201ENST00000625108 2673 ntBASIC21.77■■□□□ 1.08
CALR3Q96L12 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CALR3Q96L12 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CALR3Q96L12 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.76■■□□□ 1.07
CALR3Q96L12 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CALR3Q96L12 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CALR3Q96L12 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CALR3Q96L12 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CALR3Q96L12 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.76■■□□□ 1.07
CALR3Q96L12 AC138907.5-202ENST00000569484 235 ntBASIC21.76■■□□□ 1.07
CALR3Q96L12 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.76■■□□□ 1.07
CALR3Q96L12 AC120498.10-201ENST00000621827 505 ntBASIC21.76■■□□□ 1.07
CALR3Q96L12 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
CALR3Q96L12 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CALR3Q96L12 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.75■■□□□ 1.07
CALR3Q96L12 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.75■■□□□ 1.07
CALR3Q96L12 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CALR3Q96L12 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CALR3Q96L12 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CALR3Q96L12 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.75■■□□□ 1.07
CALR3Q96L12 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.75■■□□□ 1.07
CALR3Q96L12 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.75■■□□□ 1.07
CALR3Q96L12 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CALR3Q96L12 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.75■■□□□ 1.07
CALR3Q96L12 AL031432.3-201ENST00000607698 485 ntBASIC21.75■■□□□ 1.07
CALR3Q96L12 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CALR3Q96L12 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CALR3Q96L12 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.75■■□□□ 1.07
CALR3Q96L12 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.75■■□□□ 1.07
CALR3Q96L12 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CALR3Q96L12 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.75■■□□□ 1.07
CALR3Q96L12 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CALR3Q96L12 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
CALR3Q96L12 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CALR3Q96L12 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
CALR3Q96L12 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CALR3Q96L12 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CALR3Q96L12 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CALR3Q96L12 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.74■■□□□ 1.07
CALR3Q96L12 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CALR3Q96L12 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CALR3Q96L12 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.74■■□□□ 1.07
CALR3Q96L12 AC245052.3-201ENST00000450182 901 ntBASIC21.74■■□□□ 1.07
CALR3Q96L12 AC079140.4-201ENST00000507448 529 ntBASIC21.74■■□□□ 1.07
CALR3Q96L12 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.74■■□□□ 1.07
CALR3Q96L12 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.74■■□□□ 1.07
CALR3Q96L12 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CALR3Q96L12 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CALR3Q96L12 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.74■■□□□ 1.07
CALR3Q96L12 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CALR3Q96L12 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CALR3Q96L12 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.74■■□□□ 1.07
CALR3Q96L12 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.74■■□□□ 1.07
CALR3Q96L12 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.73■■□□□ 1.07
CALR3Q96L12 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.73■■□□□ 1.07
CALR3Q96L12 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CALR3Q96L12 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CALR3Q96L12 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CALR3Q96L12 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CALR3Q96L12 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CALR3Q96L12 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.73■■□□□ 1.07
CALR3Q96L12 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.73■■□□□ 1.07
CALR3Q96L12 AC110285.6-201ENST00000617652 491 ntBASIC21.73■■□□□ 1.07
CALR3Q96L12 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.73■■□□□ 1.07
CALR3Q96L12 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CALR3Q96L12 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.73■■□□□ 1.07
CALR3Q96L12 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms