Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITCHQ96J02 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.61■□□□□ 0.73
ITCHQ96J02 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITCHQ96J02 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITCHQ96J02 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.6■□□□□ 0.73
ITCHQ96J02 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.6■□□□□ 0.73
ITCHQ96J02 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.6■□□□□ 0.73
ITCHQ96J02 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
ITCHQ96J02 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ITCHQ96J02 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ITCHQ96J02 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ITCHQ96J02 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.6■□□□□ 0.73
ITCHQ96J02 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.6■□□□□ 0.73
ITCHQ96J02 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.6■□□□□ 0.73
ITCHQ96J02 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.6■□□□□ 0.73
ITCHQ96J02 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ITCHQ96J02 PCDHAC2-203ENST00000615316 3011 ntBASIC19.6■□□□□ 0.73
ITCHQ96J02 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ITCHQ96J02 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ITCHQ96J02 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ITCHQ96J02 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
ITCHQ96J02 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
ITCHQ96J02 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ITCHQ96J02 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ITCHQ96J02 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ITCHQ96J02 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ITCHQ96J02 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ITCHQ96J02 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ITCHQ96J02 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.59■□□□□ 0.73
ITCHQ96J02 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.59■□□□□ 0.73
ITCHQ96J02 AC012414.1-201ENST00000556676 535 ntBASIC19.59■□□□□ 0.73
ITCHQ96J02 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ITCHQ96J02 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.59■□□□□ 0.73
ITCHQ96J02 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.59■□□□□ 0.73
ITCHQ96J02 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.59■□□□□ 0.73
ITCHQ96J02 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.59■□□□□ 0.73
ITCHQ96J02 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ITCHQ96J02 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.59■□□□□ 0.73
ITCHQ96J02 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ITCHQ96J02 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
ITCHQ96J02 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ITCHQ96J02 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ITCHQ96J02 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.58■□□□□ 0.73
ITCHQ96J02 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
ITCHQ96J02 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ITCHQ96J02 AL391422.3-201ENST00000603791 2761 ntBASIC19.58■□□□□ 0.73
ITCHQ96J02 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.58■□□□□ 0.73
ITCHQ96J02 MIR939-201ENST00000401314 82 ntBASIC19.58■□□□□ 0.72
ITCHQ96J02 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ITCHQ96J02 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.58■□□□□ 0.72
ITCHQ96J02 AC091305.1-201ENST00000479476 895 ntBASIC19.58■□□□□ 0.72
ITCHQ96J02 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.58■□□□□ 0.72
ITCHQ96J02 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.58■□□□□ 0.72
ITCHQ96J02 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ITCHQ96J02 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.58■□□□□ 0.72
ITCHQ96J02 AF213884.3-201ENST00000563833 479 ntBASIC19.58■□□□□ 0.72
ITCHQ96J02 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ITCHQ96J02 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
ITCHQ96J02 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ITCHQ96J02 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.58■□□□□ 0.72
ITCHQ96J02 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
ITCHQ96J02 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
ITCHQ96J02 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.58■□□□□ 0.72
ITCHQ96J02 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ITCHQ96J02 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ITCHQ96J02 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ITCHQ96J02 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
ITCHQ96J02 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ITCHQ96J02 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ITCHQ96J02 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ITCHQ96J02 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.57■□□□□ 0.72
ITCHQ96J02 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
ITCHQ96J02 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.57■□□□□ 0.72
ITCHQ96J02 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ITCHQ96J02 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.57■□□□□ 0.72
ITCHQ96J02 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.57■□□□□ 0.72
ITCHQ96J02 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
ITCHQ96J02 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ITCHQ96J02 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.57■□□□□ 0.72
ITCHQ96J02 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.57■□□□□ 0.72
ITCHQ96J02 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ITCHQ96J02 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ITCHQ96J02 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ITCHQ96J02 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ITCHQ96J02 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
ITCHQ96J02 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.56■□□□□ 0.72
ITCHQ96J02 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ITCHQ96J02 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
ITCHQ96J02 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ITCHQ96J02 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
ITCHQ96J02 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.56■□□□□ 0.72
ITCHQ96J02 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.56■□□□□ 0.72
ITCHQ96J02 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.56■□□□□ 0.72
ITCHQ96J02 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.56■□□□□ 0.72
ITCHQ96J02 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.56■□□□□ 0.72
ITCHQ96J02 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ITCHQ96J02 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
ITCHQ96J02 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.56■□□□□ 0.72
ITCHQ96J02 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ITCHQ96J02 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms