Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM11Q96F44 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
TRIM11Q96F44 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
TRIM11Q96F44 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.79■■□□□ 1.08
TRIM11Q96F44 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.79■■□□□ 1.08
TRIM11Q96F44 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.79■■□□□ 1.08
TRIM11Q96F44 SLC7A5P1-201ENST00000568957 537 ntBASIC21.79■■□□□ 1.08
TRIM11Q96F44 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM11Q96F44 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.79■■□□□ 1.08
TRIM11Q96F44 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM11Q96F44 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM11Q96F44 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
TRIM11Q96F44 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM11Q96F44 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM11Q96F44 AC116050.2-201ENST00000612102 1779 ntBASIC21.79■■□□□ 1.08
TRIM11Q96F44 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM11Q96F44 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM11Q96F44 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM11Q96F44 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
TRIM11Q96F44 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM11Q96F44 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM11Q96F44 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM11Q96F44 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM11Q96F44 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM11Q96F44 KRT19P1-201ENST00000405746 1186 ntBASIC21.78■■□□□ 1.08
TRIM11Q96F44 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
TRIM11Q96F44 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM11Q96F44 AC243732.1-201ENST00000612648 864 ntBASIC21.78■■□□□ 1.08
TRIM11Q96F44 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM11Q96F44 AC027702.1-201ENST00000563810 1770 ntBASIC21.78■■□□□ 1.08
TRIM11Q96F44 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.78■■□□□ 1.08
TRIM11Q96F44 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM11Q96F44 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM11Q96F44 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM11Q96F44 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.78■■□□□ 1.08
TRIM11Q96F44 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM11Q96F44 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM11Q96F44 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.78■■□□□ 1.08
TRIM11Q96F44 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
TRIM11Q96F44 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
TRIM11Q96F44 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
TRIM11Q96F44 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM11Q96F44 AC020907.5-201ENST00000624372 1936 ntBASIC21.77■■□□□ 1.08
TRIM11Q96F44 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM11Q96F44 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
TRIM11Q96F44 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM11Q96F44 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM11Q96F44 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM11Q96F44 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.77■■□□□ 1.08
TRIM11Q96F44 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.77■■□□□ 1.08
TRIM11Q96F44 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.07
TRIM11Q96F44 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
TRIM11Q96F44 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
TRIM11Q96F44 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.77■■□□□ 1.07
TRIM11Q96F44 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM11Q96F44 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.76■■□□□ 1.07
TRIM11Q96F44 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.76■■□□□ 1.07
TRIM11Q96F44 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.76■■□□□ 1.07
TRIM11Q96F44 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM11Q96F44 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM11Q96F44 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.76■■□□□ 1.07
TRIM11Q96F44 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM11Q96F44 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM11Q96F44 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.76■■□□□ 1.07
TRIM11Q96F44 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM11Q96F44 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM11Q96F44 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM11Q96F44 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.75■■□□□ 1.07
TRIM11Q96F44 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM11Q96F44 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM11Q96F44 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
TRIM11Q96F44 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM11Q96F44 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.75■■□□□ 1.07
TRIM11Q96F44 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.75■■□□□ 1.07
TRIM11Q96F44 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.75■■□□□ 1.07
TRIM11Q96F44 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
TRIM11Q96F44 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.75■■□□□ 1.07
TRIM11Q96F44 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM11Q96F44 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.75■■□□□ 1.07
TRIM11Q96F44 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM11Q96F44 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM11Q96F44 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM11Q96F44 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
TRIM11Q96F44 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.75■■□□□ 1.07
TRIM11Q96F44 AC073130.3-201ENST00000624389 2278 ntBASIC21.75■■□□□ 1.07
TRIM11Q96F44 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM11Q96F44 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.74■■□□□ 1.07
TRIM11Q96F44 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
TRIM11Q96F44 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM11Q96F44 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM11Q96F44 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.74■■□□□ 1.07
TRIM11Q96F44 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
TRIM11Q96F44 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
TRIM11Q96F44 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM11Q96F44 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM11Q96F44 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM11Q96F44 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM11Q96F44 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.74■■□□□ 1.07
TRIM11Q96F44 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM11Q96F44 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms